function amd_demo %AMD_DEMO a demo of amd2, using the can_24 matrix % % A demo of AMD for MATLAB. % % Example: % amd_demo % % See also: amd, amd2, amd_make % AMD, Copyright (c) 1996-2022, Timothy A. Davis, Patrick R. Amestoy, and % Iain S. Duff. All Rights Reserved. % SPDX-License-Identifier: BSD-3-clause % This orders the same matrix as the ANSI C demo, amd_demo.c. It includes an % additional analysis of the matrix via MATLAB's symbfact routine. % First, print the help information for AMD help amd2 % Get the Harwell/Boeing can_24 matrix. load can_24 A = spconvert (can_24) ; n = size (A,1) ; clf subplot (2,2,1) ; spy (A) title ('HB/can24 matrix') ; % order the matrix. Note that the Info argument is optional. fprintf ('\nIf the next step fails, then you have\n') ; fprintf ('not yet compiled the AMD mexFunction.\n') ; [p, Info] = amd2 (A) ; %#ok % order again, but this time print some statistics [p, Info] = amd2 (A, [10 1 1]) ; fprintf ('Permutation vector:\n') ; fprintf (' %2d', p) ; fprintf ('\n\n') ; subplot (2,2,2) ; spy (A (p,p)) ; title ('Permuted matrix') ; % The amd_demo.c program stops here. fprintf ('Analyze A(p,p) with MATLAB''s symbfact routine:\n') ; [cn, height, parent, post, R] = symbfact (A (p,p)) ; subplot (2,2,3) ; spy (R') ; title ('Cholesky factor, L') ; subplot (2,2,4) ; treeplot (parent) ; title ('elimination tree') ; % results from symbfact lnz = sum (cn) ; % number of nonzeros in L, incl. diagonal cn = cn - 1 ; % get the count of off-diagonal entries fl = n + sum (cn.^2 + 2*cn) ; % flop count for chol (A (p,p) fprintf ('number of nonzeros in L (including diagonal): %d\n', lnz) ; fprintf ('floating point operation count for chol (A (p,p)): %d\n', fl) ; % approximations from amd: lnz2 = n + Info (10) ; fl2 = n + Info (11) + 2 * Info (12) ; fprintf ('\nResults from AMD''s approximate analysis:\n') ; fprintf ('number of nonzeros in L (including diagonal): %d\n', lnz2) ; fprintf ('floating point operation count for chol (A (p,p)): %d\n\n', fl2) ; if (lnz2 ~= lnz | fl ~= fl2) %#ok fprintf ('Note that the nonzero and flop counts from AMD are slight\n') ; fprintf ('upper bounds. This is due to the approximate minimum degree\n'); fprintf ('method used, in conjunction with "mass elimination".\n') ; fprintf ('See the discussion about mass elimination in amd.h and\n') ; fprintf ('amd_2.c for more details.\n') ; end