[package]
name = "archaea"
version = "0.0.12"
authors = ["jeanpierre.both@gmail.com"]
repository = "https://github.com/jean-pierreBoth/archaea"
keywords = ["hnsw", "probminhash", "bacteria"]
edition = "2021"
license = "MIT OR Apache-2.0"
description = "genome classification, probminhash hnsw archaea"



[[bin]]

name= "tohnsw"
path= "src/bin/tohnsw.rs"

[[bin]]
name= "request"
path= "src/bin/request/main.rs"


[lib]

path = "src/lib.rs"


[dependencies]
# default is version spec is ^ meaning can update up to max non null version number
# cargo doc --no-deps avoid dependencies doc generation
#

serde= {version = "1.0", features = ["derive"] }
serde_json= {version = "1.0"}

num = {version = "0.4"}



# for //
crossbeam-utils = {version = "0.8"}
crossbeam-channel = {version = "0.5"}

parking_lot ={version="0.12"}
rayon = {version = "1.5"}
num_cpus = {version = "1.13.0"}

cpu-time = {version = "1.0"}
needletail = {version = "0.4"}
clap = {version = "3.2"}

##

probminhash = {version = "0.1.6"}
#probminhash = {path = "../probminhash"}
hnsw_rs =  {version = "0.1.16"}
#hnsw_rs = {path = "../hnswlib-rs"}

#kmerutils = {path = "../kmerutils"}
kmerutils = {version = "0.0.7"}

lazy_static = { version = "1.4"}

# decreasing order of log for debug build : (max_level_)trace debug info warn error off
# decreasing order of log for release build (release_max_level_)  .. idem
#log = { version = "0.4", features = ["max_level_trace", "release_max_level_trace"] }
log = { version = "0.4"}
env_logger = { version = "0.9"}

# optional dependency to embed hnsw graph
annembed = {version = "0.0.8", optional = true}
#annembed = {path = "../annembed", optional = true}
# no more pb with between anyhow intel-mkl-src
anyhow = { version = "1.0.58" }
csv = {version = "1.1"}

[features]

default = []
#default = ["annembed_openblas-system" ]

annembed_openblas-static = [ "annembed/openblas-static"]
annembed_openblas-system = [ "annembed/openblas-system"]
annembed_intel-mkl = [ "annembed/intel-mkl-static"]

withzmq = ["kmerutils/withzmq"]