# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2021"
name = "bigtools"
version = "0.5.3"
authors = ["Jack Huey <jackh726@gmail.com>"]
build = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "A library and associated tools for reading and writing bigwigs and bigbeds"
documentation = "https://docs.rs/bigtools"
readme = "README.md"
keywords = [
    "bigwig",
    "bio",
]
license = "MIT"
repository = "https://github.com/jackh726/bigtools"

[lib]
name = "bigtools"
path = "src/lib.rs"

[[bin]]
name = "bedgraphtobigwig"
path = "src/bin/bedgraphtobigwig.rs"
required-features = ["cli"]

[[bin]]
name = "bedtobigbed"
path = "src/bin/bedtobigbed.rs"
required-features = ["cli"]

[[bin]]
name = "bigbedinfo"
path = "src/bin/bigbedinfo.rs"
required-features = ["cli"]

[[bin]]
name = "bigbedtobed"
path = "src/bin/bigbedtobed.rs"
required-features = ["cli"]

[[bin]]
name = "bigtools"
path = "src/bin/bigtools.rs"
required-features = ["cli"]

[[bin]]
name = "bigwigaverageoverbed"
path = "src/bin/bigwigaverageoverbed.rs"
required-features = ["cli"]

[[bin]]
name = "bigwiginfo"
path = "src/bin/bigwiginfo.rs"
required-features = ["cli"]

[[bin]]
name = "bigwigmerge"
path = "src/bin/bigwigmerge.rs"
required-features = ["cli"]

[[bin]]
name = "bigwigtobedgraph"
path = "src/bin/bigwigtobedgraph.rs"
required-features = ["cli"]

[[bin]]
name = "bigwigvaluesoverbed"
path = "src/bin/bigwigvaluesoverbed.rs"
required-features = ["cli"]

[[test]]
name = "bigbedwrite"
path = "tests/bigbedwrite.rs"

[[test]]
name = "bigwigread"
path = "tests/bigwigread.rs"

[[test]]
name = "bigwigwrite"
path = "tests/bigwigwrite.rs"

[dependencies.anyhow]
version = "1"
optional = true

[dependencies.attohttpc]
version = "0.25"
features = ["tls-rustls-native-roots"]
optional = true
default_features = false

[dependencies.bincode]
version = "1.3"
optional = true

[dependencies.byteorder]
version = "1"

[dependencies.byteordered]
version = "0.6.0"

[dependencies.bytes]
version = "1.4.0"
optional = true

[dependencies.clap]
version = "4.3"
features = ["derive"]
optional = true

[dependencies.crossbeam-channel]
version = "0.5"
optional = true

[dependencies.crossbeam-utils]
version = "0.8"

[dependencies.futures]
version = "0.3.28"
features = ["thread-pool"]
optional = true

[dependencies.index_list]
version = "0.2.13"
optional = true

[dependencies.itertools]
version = "0.10"
optional = true

[dependencies.libdeflater]
version = "0.13"

[dependencies.ryu]
version = "1.0"
optional = true

[dependencies.serde]
version = "1"
features = ["derive"]
optional = true

[dependencies.smallvec]
version = "1.11.2"
features = ["write"]

[dependencies.tempfile]
version = "3"
optional = true

[dependencies.thiserror]
version = "1"

[dependencies.tokio]
version = "1.34.0"
features = [
    "rt",
    "rt-multi-thread",
]

[dependencies.ufmt]
version = "0.2"
features = ["std"]
optional = true

[dev-dependencies.rand]
version = "0.8"

[features]
cli = [
    "anyhow",
    "clap",
    "ryu",
    "ufmt",
    "read",
    "write",
]
default = [
    "remote",
    "read",
    "write",
    "cli",
]
read = [
    "bytes",
    "itertools",
]
remote = [
    "attohttpc",
    "tempfile",
]
write = [
    "crossbeam-channel",
    "tempfile",
    "futures",
    "serde",
    "itertools",
    "bincode",
    "index_list",
]