Musilová Jana xmusil57@vutbr.cz Brno University of Technology 2019-03-21T08:45:31Z 2019-04-03T08:30:36Z

A gene coding for an aldehyde/alcohol dehydrogenase in C. acetobutylicum! (in C. beijerinckii is missing -> activates ethanol production?) see Molecular characterization of an aldehyde/alcohol dehydrogenase gene from Clostridium acetobutylicum ATCC 824: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC205125/

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PTS converts carbohydrates into phosphoesters; containing genes: ptsI, ptsH, hprK, manIIAB, manIIC (X276_23240, X276_02985), manIID (X276_23235, X276_02990), manIIB, manIIA

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σ factor; family sigma 70; GenBank locus tag in reference sequence NZ_CP011966.2: X276_22455

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butyryl-CoA dehydrogenase; K00248 ; KEGG: Cbei_0322

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Lactate production occurs only when ferredoxin and hydrogenase level is reduced

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alcohol dehydrogenase B; KEGG: Cbei_1722

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Phosphate acetyltransferase; X276_20710; Cbei_1164

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3-hydroxybutyryl-CoA dehydrogenase; K00074; KEGG: Cbei_0325

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scoB; CoA transferase subunit B; part of the sol operon; K01029; KEGG: Cbei_3834, Cbei_2653

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butanol dehydrogenase; K00100 Source: https://www.genome.jp/kegg-bin/show_pathway?org_name=cbe&mapno=00650&mapscale=1.0&show_description=hide

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sporulation stage 0 transcription factor. GenBank locus tag in reference sequence NZ_CP011966.2: X276_RS08400

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Butyrate (acid) producer. GenBank locus tag in reference sequence NZ_CP011966.2: X276_RS01200; KEGG: Cbei_0204, Cbei_4006, Cbei_4609

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sporulation sigma factor SigF; GenBank locus tag in reference sequence NZ_CP011966.2: X276_22650

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alcohol dehydrogenase A; KEGG: Cbei_2181

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GenBank locus tag in reference sequence NZ_CP011966.2: X276_20950

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Butyryl phosphate

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GenBank locus tag in reference sequence NZ_CP011966.2: X276_20920

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phosphate butyryltransferase; GenBank locus tag in reference sequence NZ_CP011966.2: X276_25645; Cbei_4899

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Butyralaldehyde

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https://biocyc.org/META/NEW-IMAGE?type=PATHWAY&object=PWY-6594

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Genes for the enzymes involved in the subsequent C-3 part of glycolysis

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aldehyde dehydrogenase, butanol (solvent) producer; part of the sol operon. GenBank locus tag in reference sequence NZ_CP011966.2: X276_RS20360; KEGG: Cbei_3832; key enzyme in the formation of butyraldehyde from butyryl-CoA; corresponding to adhE1 in C. acetobutylicum

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pyruvate kinase; X276_01375

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enoyl-CoA hydratase; K01715; KEGG: Cbei_0322

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butanoyl-CoA

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n-butanoate https://biocyc.org/META/NEW-IMAGE?type=PATHWAY&object=PWY-6594

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Gene encodes a member of the glucose phosphate isomerase protein family. X276_25070

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complex of genes: X276_14415, 14410, 14405, 14400, 14395, 14390, 14385

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acetate kinase; X276_20705; Cbei_1165

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phosphorylated sporulation stage 0 transcription factor.

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electron-transferring flavoprotein complex

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GenBank locus tag in reference sequence NZ_CP011966.2: X276_22660

spoIIAA is dephophorylated by SPOIIAB -> unfunction; spoIIE phosphorylates spoIIAA and spoIIAA inactivated spoIIAB

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phosphorylaion spoIIA by spoIIAB

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GenBank locus tag in reference sequence NZ_CP011966.2: X276_01205

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sporulation sigma factor SigE

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6-phosphofructokinase; X276_01370

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thiolase, acetyl-CoA acetyltransferase; K00626; KEGG: Cbei_0411

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fructose bisphosphate aldolase; X276_17335 and X276_11155; KEGG: Cbei_1903

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acetoacetate decarboxylase; part of the sol operon; KEGG: Cbei_3835

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It seemed that butanol could disrupt fluidity and function of the cell membrane. Destroyed cell membrane causes cell death

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anti-sigma F factor; Cbei_0813; GenBank locus tag in reference sequence NZ_CP011966.2: X276_22655

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CoA transferase subunit A; part of the sol operon; KEGG: Cbei_3833, Cbei_2654

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Pyruvate is the product of glucose. Solvents (ABE) inhibit glucose uptake (due to the restriction of CellCollective inhibition of pyruvate instead of glucose)

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S_52 1 S_47 1 S_66 1 S_5 1 S_47 1 S_37 1 S_10 1 S_56 1 S_44 1 S_52 1 S_47 1 S_20 1 S_41 1 S_52 1 S_24 1 S_2 1 S_52 1 S_47 1 S_52 1 S_47 1 S_47 1 S_19 1 S_47 1 S_47 1 S_52 1 S_33 1 S_64 1 S_33 1 S_45 1 S_64 1 S_33 1 S_64 1 S_35 1 S_35 1 S_64 1 S_47 1 S_22 1 S_39 1 S_54 1 S_52 1 S_47 1 S_66 1 S_58 1 S_28 1 S_56 1 S_5 1 S_26 1 S_62 1 S_57 1 S_52 1 S_62 1 S_57 1 S_62 1 S_26 1 S_52 1 S_62 1 S_30 1 S_13 1 S_39 1 S_25 1 S_38 1 S_46 1 S_6 1 S_38 1 S_19 1 S_47 1 S_55 1 S_8 1 S_28 1 S_52 1 S_24 1 S_30 1 S_11 1 S_56 1 S_65 1 S_52 1 S_47 1 S_60 1 S_52 1 S_36 1 S_52 1 S_41 1 S_56 1 S_30 1 S_48 1 S_40 1 S_1 1 S_4 1 S_37 1 S_5 1 S_15 1 S_41 1 S_23 1 S_41 1 S_25 1 S_41 1 S_53 1 S_47 1 S_52 1 S_14 1 S_35 1 S_52 1 S_53 1 S_35 1 S_14 1 S_52 1 S_35 1 S_14 1 S_52 1 S_43 1 S_33 1 S_47 1 S_45 1 S_64 1 S_49 1 S_47 1 S_47 1 S_62 1 S_54 1 S_53 1 S_62 1 S_19 1 S_62 1 S_53 1 S_45 1 S_62 1 S_22 1 S_53 1 S_62 1 S_47 1 S_16 1 S_58 1 S_24 1 S_10 1 S_11 1 S_47 1 S_47 1 S_18 1 S_12 1 S_52 1 S_34 1 S_12 1 S_52 1 S_3 1 S_12 1 S_52 1 S_57 1 S_63 1 S_38 1 S_61 1 S_41 1 S_38 1 S_61 1 S_27 1 S_52 1 S_18 1 S_52 1 S_21 1 S_52 1 S_13 1 S_52 1 S_3 1 S_52 1 S_47 1 S_45 1 S_49 1 S_33 1 S_47 1 S_31 1 S_25 1 S_29 1 S_42 1 S_59 1