channels:
  - conda-forge
  - bioconda
  - defaults
dependencies:
  - samtools >=1.9
  - coreutils
  - minimap2 >=2.24
  - bwa >=0.7.17
  - bwa-mem2
  - dashing >= 0.4.0, < 1.0 # dashing 1.0 build gives illegal instruction errors.
  - fastani >= 1.3
  - strobealign >= 0.11.0 # newest version at time of implementation
  - extern