# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2021"
name = "crispr_screen"
version = "0.3.19"
build = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "A fast and configurable differential expression analysis tool for CRISPR screens"
homepage = "https://noamteyssier.github.io/crispr_screen/"
documentation = "https://docs.rs/crispr_screen"
readme = "README.md"
keywords = [
    "cli",
    "CRISPR",
    "bioinformatics",
    "degs",
    "sgRNA",
]
categories = [
    "command-line-utilities",
    "science",
]
license = "MIT"
repository = "https://github.com/noamteyssier/crispr_screen"

[profile.release]
lto = true

[[bin]]
name = "crispr_screen"
path = "src/main.rs"

[dependencies.adjustp]
version = "0.1.6"

[dependencies.alpha-rra]
version = "0.3.3"

[dependencies.anyhow]
version = "1.0.89"

[dependencies.bon]
version = "2.3.0"

[dependencies.clap]
version = "4.5.19"
features = ["derive"]

[dependencies.colored]
version = "2.1.0"

[dependencies.geopagg]
version = "0.2.9"

[dependencies.getset]
version = "0.1.3"

[dependencies.hashbrown]
version = "0.15.0"

[dependencies.intc]
version = "0.3.6"

[dependencies.ndarray]
version = "0.16.1"

[dependencies.ndarray-rand]
version = "0.15.0"

[dependencies.ndarray-stats]
version = "0.6.0"

[dependencies.polars]
version = "0.43.1"
features = ["csv"]
default-features = false

[dependencies.rand]
version = "0.8.5"

[dependencies.rand_chacha]
version = "0.3.1"

[dependencies.rand_distr]
version = "0.4.3"

[dependencies.rayon]
version = "1.10.0"

[dependencies.regex]
version = "1.11.0"

[dependencies.statrs]
version = "0.17.1"