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[package]
edition = "2021"
name = "deepbiop-cli"
version = "0.1.11"
authors = ["Yangyang Li <sunlifeliz5@gmail.com>"]
build = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "CLI tool for Processing Biological Data."
homepage = "https://github.com/cauliyang/DeepBioP"
readme = "README.md"
keywords = [
    "deep-learning",
    "bioinformatics",
    "biological-data",
    "cli",
]
license = "Apache-2.0"
repository = "https://github.com/cauliyang/DeepBioP"

[[bin]]
name = "dbp"
path = "src/main.rs"

[dependencies.ahash]
version = "0.8.11"

[dependencies.anyhow]
version = "1.0"

[dependencies.clap]
version = "4.5"
features = ["derive"]

[dependencies.clap-verbosity-flag]
version = "2.2"

[dependencies.clap_complete]
version = "4.5"

[dependencies.ctrlc]
version = "3.4"

[dependencies.deepbiop-bam]
version = "0.1.11"

[dependencies.deepbiop-fq]
version = "0.1.11"

[dependencies.deepbiop-utils]
version = "0.1.11"

[dependencies.env_logger]
version = "0.11.5"

[dependencies.human-panic]
version = "2.0"

[dependencies.log]
version = "0.4"

[dependencies.noodles]
version = "0.79.0"
features = [
    "bgzf",
    "core",
    "csi",
    "fasta",
    "fastq",
    "sam",
    "bam",
]

[dependencies.rayon]
version = "1.8"