#!/usr/bin/env python import sys from os.path import * from pyflann import * from guppy import hpy from numpy.random import rand import os, gc _proc_status = '/proc/%d/status' % os.getpid() _scale = {'kB': 1024.0, 'mB': 1024.0*1024.0, 'KB': 1024.0, 'MB': 1024.0*1024.0} def _VmB(VmKey): '''Private. ''' global _proc_status, _scale # get pseudo file /proc//status try: t = open(_proc_status) v = t.read() t.close() except: return 0.0 # non-Linux? # get VmKey line e.g. 'VmRSS: 9999 kB\n ...' i = v.index(VmKey) v = v[i:].split(None, 3) # whitespace if len(v) < 3: return 0.0 # invalid format? # convert Vm value to bytes return float(v[1]) * _scale[v[2]] def memory(since=0.0): '''Return memory usage in bytes. ''' return _VmB('VmSize:') - since def resident(since=0.0): '''Return resident memory usage in bytes. ''' return _VmB('VmRSS:') - since def stacksize(since=0.0): '''Return stack size in bytes. ''' return _VmB('VmStk:') - since if __name__ == '__main__': print 'Profiling Memory usage for pyflann; CTRL-C to stop.' print 'Increasing total process memory, relative to the python memory, ' print 'implies a memory leak in the external libs.' print 'Increasing python memory implies a memory leak in the python code.' h = hpy() while True: s = str(h.heap()) print 'Python: %s; Process Total: %s' % (s[:s.find('\n')], memory()) X1 = rand(50000, 2) X2 = rand(50000, 2) pf = FLANN() nnlist = pf.nn(X1, X2) del X1 del X2 del nnlist del pf gc.collect()