Transition=
GG      0.9990
GE      0.0010
ER      0.9965
ES	0.0030
ES1	0.0005
RS      0.0040
RR      0.9920
MM      0.9908
MI      0.0033
MD      0.0009
II      0.1002
IM      0.8998
DD      0.0002
DM      0.9998
TransitionMI=
A       A       0.0035
A       C       0.3565
A       G       0.2671
A       T       0.3730
C       A       0.2898
C       C       0.0016
C       G       0.3537
C       T       0.3550
G       A       0.3687
G       C       0.2201
G       G       0.0014
G       T       0.4098
T       A       0.5050
T       C       0.2687
T       G       0.2224
T       T       0.0039
TransitionII=
A       A       0.9858
A       C       0.0099
A       G       0.0043
A       T       0.0000
C       A       0.0000
C       C       0.9837
C       G       0.0089
C       T       0.0073
G       A       0.0057
G       C       0.0000
G       G       0.9798
G       T       0.0145
T       A       0.0131
T       C       0.0043
T       G       0.0001
T       T       0.9825
PI=
S	0.000001	
E	0.000001
R	0.077
S_1	0.000001
E_1	0.000001
M1	0.077
M2	0.077
M3	0.077
M4	0.077
M5	0.077
M6	0.077
M1_1	0.077
M2_1	0.077
M3_1	0.077
M4_1	0.077
M5_1	0.077
M6_1	0.077
I1	0.000001
I2	0.000001
I3	0.000001
I4	0.000001
I5	0.000001
I6	0.000001
I1_1	0.000001
I2_1	0.000001
I3_1	0.000001
I4_1	0.000001
I5_1	0.000001
I6_1	0.000001