/*========================================================================= Program: GDCM (Grassroots DICOM). A DICOM library Copyright (c) 2006-2011 Mathieu Malaterre All rights reserved. See Copyright.txt or http://gdcm.sourceforge.net/Copyright.html for details. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the above copyright notice for more information. =========================================================================*/ #include "gdcmIPPSorter.h" #include "gdcmDirectory.h" #include "gdcmTesting.h" #include "gdcmSystem.h" #include "gdcmTrace.h" #include "gdcmReader.h" #include "gdcmWriter.h" int TestIPPSorter3(int , char *[]) { const char *directory = gdcm::Testing::GetDataRoot(); std::vector filenames; // let's take 4 files that can be sorted: std::string file0 = std::string(directory) + "/SIEMENS_MAGNETOM-12-MONO2-FileSeq0.dcm"; std::string file1 = std::string(directory) + "/SIEMENS_MAGNETOM-12-MONO2-FileSeq1.dcm"; std::string file2 = std::string(directory) + "/SIEMENS_MAGNETOM-12-MONO2-FileSeq2.dcm"; std::string file3 = std::string(directory) + "/SIEMENS_MAGNETOM-12-MONO2-FileSeq3.dcm"; // Make a fake copy: const char * reference = file0.c_str(); gdcm::Reader reader; reader.SetFileName( reference ); if( !reader.Read() ) return 1; // Create directory first: const char subdir[] = "TestIPPSorter3"; std::string tmpdir = gdcm::Testing::GetTempDirectory( subdir ); if( !gdcm::System::FileIsDirectory( tmpdir.c_str() ) ) { gdcm::System::MakeDirectory( tmpdir.c_str() ); //return 1; } std::string outfilename = gdcm::Testing::GetTempFilename( reference, subdir ); // Tweak the orientation just a little: // [001.000000E+00\-0.000000E+00\-0.000000E+00\00.000000E+00\01.000000E+00\-0.000000E+00] gdcm::Writer writer; writer.SetFileName( outfilename.c_str() ); //const char iop_orig[] = "1\\-0\\-0\\0\\1\\-0"; const char iop[] = R"(1\-0\-0\0\0.99999\0.00001)"; gdcm::DataElement de( gdcm::Tag(0x0020,0x0037) ); de.SetByteValue( iop, (uint32_t)strlen( iop ) ); reader.GetFile().GetDataSet().Replace( de ); writer.SetFile( reader.GetFile() ); if( !writer.Write() ) { return 1; } // let's push them in random order (oh my god how are we going to succeed ??) filenames.push_back( file1 ); filenames.push_back( file3 ); filenames.push_back( outfilename ); filenames.push_back( file2 ); //filenames.push_back( file0 ); gdcm::IPPSorter s; s.SetComputeZSpacing( true ); s.SetZSpacingTolerance( 1e-10 ); s.SetDirectionCosinesTolerance( 1e-6 ); bool b = s.Sort( filenames ); if( b ) { std::cerr << "Success to sort (we should have failed): " << directory << std::endl; return 1; } // Lower the threshold: s.SetDirectionCosinesTolerance( 1e-5 ); b = s.Sort( filenames ); if( !b ) { std::cerr << "Failed to sort: " << directory << std::endl; return 1; } // std::cout << "Sorting succeeded:" << std::endl; // s.Print( std::cout ); double zspacing = s.GetZSpacing(); if(!zspacing) { std::cerr << "computation of ZSpacing failed." << std::endl; return 1; } std::cout << "Found z-spacing:" << std::endl; std::cout << s.GetZSpacing() << std::endl; return 0; }