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[package]
edition = "2018"
name = "genomic_interval_pipeline"
version = "0.1.3"
authors = ["Christopher Cole <ccole@well.ox.ac.uk>"]
exclude = ["data/"]
description = "A pipeline for creating HDF5 databases from genomic intervals."
homepage = "https://github.com/Chris1221/genomic_interval_pipeline"
readme = "README.md"
keywords = ["genetics", "genomics", "HDF5", "keras", "intervals"]
categories = ["command-line-utilities", "database", "science"]
license = "MIT"
repository = "https://github.com/Chris1221/genomic_interval_pipeline"
[dependencies.env_logger]
version = "0.7.1"

[dependencies.flate2]
version = "1.0.19"

[dependencies.hdf5]
version = "0.7.0"

[dependencies.log]
version = "0.4"

[dependencies.memrange]
version = "0.1.3"

[dependencies.ndarray]
version = "0.13.1"

[dependencies.pbr]
version = "1.0.3"

[dependencies.rust-htslib]
version = "0.35.2"

[dependencies.structopt]
version = "0.3.14"

[dependencies.theban_interval_tree]
version = "0.7.1"