# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2018"
name = "ggca"
version = "1.0.0"
authors = [
    "JWare Solutions <jware.organization@gmail.com>",
    "Sergio Leandro Calderón <bs.sergiocalderon@gmail.com>",
]
build = false
exclude = [
    ".*",
    "*.tar.gz",
    "*.sh",
]
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "Computes efficiently the correlation (Pearson, Spearman or Kendall) and the p-value (two-sided) between all the pairs from two datasets"
documentation = "https://docs.rs/ggca/"
readme = "README.md"
keywords = [
    "mRNA",
    "expression",
    "modulation",
    "correlation",
    "p-value",
]
license = "GPL-3.0"
repository = "https://github.com/jware-solutions/ggca"

[lib]
name = "ggca"
crate-type = [
    "cdylib",
    "rlib",
]
path = "src/lib.rs"

[[example]]
name = "basic"
path = "examples/basic.rs"

[[example]]
name = "cpg_site_ids"
path = "examples/cpg_site_ids.rs"

[[test]]
name = "benjamini_hochberg"
path = "tests/benjamini_hochberg.rs"

[[test]]
name = "benjamini_yekutieli"
path = "tests/benjamini_yekutieli.rs"

[[test]]
name = "bonferroni"
path = "tests/bonferroni.rs"

[[test]]
name = "cpg_site_ids"
path = "tests/cpg_site_ids.rs"

[[test]]
name = "kendall"
path = "tests/kendall.rs"

[[test]]
name = "nan_filtering"
path = "tests/nan_filtering.rs"

[[test]]
name = "pearson"
path = "tests/pearson.rs"

[[test]]
name = "spearman"
path = "tests/spearman.rs"

[[bench]]
name = "benchmarks"
path = "benches/benchmarks.rs"
harness = false

[dependencies.bincode]
version = "1.3.1"

[dependencies.csv]
version = "1.1"

[dependencies.env_logger]
version = "0.9.0"

[dependencies.extsort]
version = "0.4.2"

[dependencies.fast-float]
version = "0.2"

[dependencies.itertools]
version = "0.9.0"

[dependencies.lazy_static]
version = "1.4.0"

[dependencies.log]
version = "0.4.14"

[dependencies.pyo3]
version = "0.22.2"
features = ["extension-module"]

[dependencies.rayon]
version = "1.10.0"

[dependencies.serde]
version = "1.0.14"
default-features = false

[dependencies.serde_derive]
version = "1.0.14"
default-features = false

[dependencies.statrs]
version = "0.17.1"

[dev-dependencies.approx]
version = "0.5.0"

[dev-dependencies.criterion]
version = "0.5.1"

[features]
default = ["extension-module"]
extension-module = ["pyo3/extension-module"]