##fileformat=VCFv4.2
##source=minos, version 0.4.1
##fileDate=2018-04-26
##FORMAT=<ID=COV,Number=R,Type=Integer,Description="Number of reads on ref and alt alleles">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=DP,Number=1,Type=Integer,Description="total kmer depth from gramtools",Source="minos">
##FORMAT=<ID=GT_CONF,Number=1,Type=Float,Description="Genotype confidence. Difference in log likelihood of most likely and next most likely genotype">
##INFO=<ID=KMER,Number=1,Type=Integer,Description="Kmer size at which variant was discovered (kmer-size used by gramtools build)">
##minos_max_read_length=200
##contig=<ID=TEST_DNA,length=99>
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	03.vcf
TEST_DNA	2	.	A	G	.	PASS	KMER=15	GT:DP:COV:GT_CONF	./.:2:1,1:2.05
TEST_DNA	4	.	A	G,T	.	MIN_GCP;MIN_DP;MIN_FRS	KMER=15	GT:DP:COV:GT_CONF	./.:4:1,2,1:3.77
TEST_DNA	6	.	AAA	GGT,GTA,ATA	.	PASS	KMER=15	GT:DP:COV:GT_CONF	./.:4:1,1,1,1:2.76
TEST_DNA	12	.	C	T	.	PASS	KMER=15	GT:DP:COV:GT_CONF	1/1:50:0,50:200.58
TEST_DNA	14	.	C	T,G	.	PASS	KMER=15	GT:DP:COV:GT_CONF	2/2:45:0,2,43:155.58
TEST_DNA	16	.	CCC	TGC,GTG	.	PASS	KMER=15	GT:DP:COV:GT_CONF	1/1:70:0,68,8:300.25
TEST_DNA	22	.	G	T,C,A	.	PASS	KMER=15	GT:DP:COV:GT_CONF	1/2:202:1,99,100,2:613.77
TEST_DNA	24	.	G	T,C,A	.	PASS	KMER=15	GT:DP:COV:GT_CONF	0/2:202:99,1,100,2:613.77
TEST_DNA	26	.	GG	AA,CT,AT	.	PASS	KMER=15	GT:DP:COV:GT_CONF	1/2:100:0,48,50,2:475.54
TEST_DNA	28	.	GG	AA,T,A	.	PASS	KMER=15	GT:DP:COV:GT_CONF	1/3:100:0,48,2,50:315.11
TEST_DNA	33	.	T	TTT	.	PASS	KMER=15	GT:DP:COV:GT_CONF	1/1:200:1,199:145.21
TEST_DNA	36	.	TT	T	.	PASS	KMER=15	GT:DP:COV:GT_CONF	1/1:200:1,199:145.21
TEST_DNA	39	.	TT	AGT	.	PASS	KMER=15	GT:DP:COV:GT_CONF	1/1:200:1,199:145.21
TEST_DNA	65	.	GG	CAGG	.	PASS	KMER=15	GT:DP:COV:GT_CONF	1/1:200:1,199:145.21
TEST_DNA	69	.	GG	GG	.	PASS	KMER=15	GT:DP:COV:GT_CONF	0/0:200:1,199:145.21
TEST_DNA	73	.	T	TA,AT	.	PASS	KMER=15	GT:DP:COV:GT_CONF	1/1:200:1,198,1:145.21