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[package]
edition = "2021"
name = "gtars"
version = "0.1.1"
description = "Performance-critical tools to manipulate, analyze, and process genomic interval data. Primarily focused on building tools for geniml - our genomic machine learning python package."
readme = "README.md"
license = "MIT"

[dependencies.anyhow]
version = "1.0.82"

[dependencies.bigtools]
version = "0.5.4"

[dependencies.bstr]
version = "1.10.0"

[dependencies.byteorder]
version = "1.5.0"

[dependencies.bytes]
version = "1.6.0"

[dependencies.clap]
version = "4.4.7"
features = ["derive"]

[dependencies.flate2]
version = "1.0.28"

[dependencies.glob]
version = "0.3.1"

[dependencies.indicatif]
version = "0.17.8"

[dependencies.ndarray]
version = "0.15.6"

[dependencies.ndarray-npy]
version = "0.8.1"

[dependencies.noodles]
version = "0.83.0"
features = [
    "bam",
    "sam",
    "bgzf",
]

[dependencies.os_pipe]
version = "1.2.1"

[dependencies.rayon]
version = "1.10.0"

[dependencies.rust-lapper]
version = "1.1.0"

[dependencies.serde]
version = "1.0.203"
features = ["derive"]

[dependencies.tempfile]
version = "3.10.1"

[dependencies.tokio]
version = "1.40.0"

[dependencies.toml]
version = "0.8.14"

[dev-dependencies.pretty_assertions]
version = "1.4.0"

[dev-dependencies.rstest]
version = "0.18.2"

[dev-dependencies.tempfile]
version = "3.8.1"