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[package]
edition = "2021"
rust-version = "1.75"
name = "htsget-search"
version = "0.9.1"
authors = [
    "Christian Perez Llamas <chrispz@gmail.com>",
    "Marko Malenic <mmalenic1@gmail.com>",
    "Roman Valls Guimera <brainstorm@nopcode.org>",
]
build = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "The primary mechanism by which htsget-rs interacts with, and processes bioinformatics files. It does this by using noodles to query files and their indices."
homepage = "https://github.com/umccr/htsget-rs/blob/main/htsget-search/README.md"
documentation = "https://github.com/umccr/htsget-rs/blob/main/htsget-search/README.md"
readme = "README.md"
license = "MIT"
repository = "https://github.com/umccr/htsget-rs"

[lib]
name = "htsget_search"
path = "src/lib.rs"

[[bench]]
name = "search-benchmarks"
path = "benches/search_benchmarks.rs"
harness = false

[dependencies.async-trait]
version = "0.1"

[dependencies.futures]
version = "0.3"

[dependencies.futures-util]
version = "0.3"

[dependencies.htsget-config]
version = "0.12.0"
default-features = false

[dependencies.htsget-storage]
version = "0.2.1"
default-features = false

[dependencies.htsget-test]
version = "0.7.1"
features = ["http"]
default-features = false

[dependencies.noodles]
version = "0.83"
features = [
    "async",
    "core",
    "bgzf",
    "bam",
    "bcf",
    "cram",
    "csi",
    "sam",
    "tabix",
    "vcf",
]

[dependencies.thiserror]
version = "1"

[dependencies.tokio]
version = "1"
features = [
    "macros",
    "rt-multi-thread",
]

[dependencies.tracing]
version = "0.1"

[dev-dependencies.criterion]
version = "0.5"
features = ["async_tokio"]

[dev-dependencies.http]
version = "1"

[dev-dependencies.tempfile]
version = "3"

[features]
default = []
experimental = [
    "htsget-storage/experimental",
    "htsget-config/experimental",
    "htsget-test/experimental",
]
s3-storage = [
    "htsget-storage/s3-storage",
    "htsget-config/s3-storage",
    "htsget-test/s3-storage",
    "htsget-test/aws-mocks",
]
url-storage = [
    "htsget-storage/url-storage",
    "htsget-config/url-storage",
    "htsget-test/url-storage",
]