# hmmbuild :: profile HMM construction from multiple sequence alignments # HMMER 3.4 (Aug 2023); http://hmmer.org/ # Copyright (C) 2023 Howard Hughes Medical Institute. # Freely distributed under the BSD open source license. # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # input alignment file: MADE1.sto # output HMM file: MADE1.hmm # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # idx name nseq alen mlen W eff_nseq re/pos description #---- -------------------- ----- ----- ----- ----- -------- ------ ----------- 1 MADE1 100 304 80 278 4.23 0.708 MADE1 (MAriner Derived Element 1), a TcMar-Mariner ... # CPU time: 0.02u 0.00s 00:00:00.02 Elapsed: 00:00:00.02