Easel - a library of C functions for biological sequence analysis Copyright (C) 1990-2023 Sean R. Eddy Copyright (C) 2015-2023 President and Fellows of Harvard College Copyright (C) 2000-2023 Howard Hughes Medical Institute Copyright (C) 1995-2006 Washington University School of Medicine Copyright (C) 1992-1995 MRC Laboratory of Molecular Biology, UK ------------------------------------------------------------------- Easel's code includes contributions from members of the Eddy/Rivas laboratory at Harvard University, the HMMER and Infernal development teams, and other colleagues, including: Tyler Camp Nick Carter Michael Farrar Graeme Mitchison Eric Nawrocki Sam Petti Elena Rivas Travis Wheeler Easel also includes code we have incorporated from other sources and authors -- including public domain code, and licensed copyrighted code. Sources and licenses are noted in the appropriate places in individual files. Copyright holders and contributors include: Barry W. Brown, James Lovato esl_random:esl_rnd_Gaussian() Bob Jenkins esl_random::esl_rnd_mix3() Steven G. Johnson, and others autoconf macros in m4/ Martin Larralde ARM Neon support Kevin Lawler esl_rand64::esl_rand64_Deal() Stephen Moshier SIMD vectorized logf,expf Takuji Nishimura, Makoto Matsumoto esl_random, esl_rand64 Julien Pommier SIMD vectorized logf,expf David Robert Nadeau esl_stopwatch Henry Spencer esl_regexp David Wheeler easel::esl_tmpfile() Free Software Foundation, Inc. configure FreeBSD easel::esl_strsep() Sun Microsystems, Inc. esl_stats::esl_erfc() Easel development is supported in part by the National Human Genome Research Institute of the US National Institutes of Health under grant number R01HG009116. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health. The Easel library is open source software. It is freely distributed under the terms of the BSD (Berkeley Software Distribution) open source license: Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: 1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. 2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.