/* esl_config.h.in [input to configure] * * System-dependent configuration of Easel, by autoconf. * * This file should be included in all Easel .c files before * anything else, because it may set #define's that control * behaviour of system includes and system libraries. An example * is large file support. * */ #ifndef eslCONFIG_INCLUDED #define eslCONFIG_INCLUDED /* Version info. */ #undef EASEL_VERSION #undef EASEL_DATE #undef EASEL_COPYRIGHT #undef EASEL_LICENSE #undef EASEL_URL /* Control of debugging instrumentation */ #undef eslDEBUGLEVEL // debugging/assertion verbosity level: (0=none;3=most verbose) #undef eslENABLE_ASAN // some unit tests may need to know if AddressSanitizer is in use #undef eslENABLE_TSAN // ... ditto, for ThreadSanitizer /* Optional parallel implementation support */ #undef eslENABLE_SSE #undef eslENABLE_SSE4 #undef eslENABLE_AVX #undef eslENABLE_AVX512 #undef eslENABLE_NEON #undef eslENABLE_VMX #undef eslHAVE_NEON_AARCH64 #undef eslENABLE_CUDA // Should we build CUDA GPU acceleration? #undef HAVE_FLUSH_ZERO_MODE // On x86 platforms: we can turn off denormalized floating point math, #undef HAVE_DENORMALS_ZERO_MODE // which often incurs performance penalty. See simdvec.md in HMMER. #undef HAVE_MPI #undef HAVE_PTHREAD /* Programs */ #undef HAVE_GZIP /* Libraries */ #undef HAVE_LIBGSL /* Headers */ #undef HAVE_ENDIAN_H #undef HAVE_INTTYPES_H #undef HAVE_STDINT_H #undef HAVE_UNISTD_H #undef HAVE_SYS_TYPES_H #undef HAVE_STRINGS_H #undef HAVE_NETINET_IN_H /* On FreeBSD, you need netinet/in.h for struct sockaddr_in */ #undef HAVE_SYS_PARAM_H #undef HAVE_SYS_SYSCTL_H /* Types */ #undef WORDS_BIGENDIAN #undef int8_t #undef int16_t #undef int32_t #undef int64_t #undef uint8_t #undef uint16_t #undef uint32_t #undef uint64_t #undef off_t /* Compiler characteristics */ #undef HAVE_FUNC_ATTRIBUTE_NORETURN // Compiler supports __attribute__((__noreturn__)), helps w/ clang static analysis. #undef HAVE_FUNC_ATTRIBUTE_FORMAT // Compiler supports __attribute__((format(a,b,c))), typechecking printf-like functions /* Functions */ #undef HAVE_ALIGNED_ALLOC // esl_alloc #undef HAVE_ERFC // esl_stats #undef HAVE_GETCWD // esl_getcwd #undef HAVE_GETPID // esl_random #undef HAVE__MM_MALLOC // esl_alloc #undef HAVE_POPEN // various file parsers that check for piped input #undef HAVE_POSIX_MEMALIGN // esl_alloc #undef HAVE_STRCASECMP // easel::esl_strcasecmp() #undef HAVE_STRSEP // easel::esl_strsep() #undef HAVE_SYSCONF // esl_threads, asking system for cpu number #undef HAVE_SYSCTL // esl_threads, "" #undef HAVE_TIMES // esl_stopwatch #undef HAVE_FSEEKO /* System services */ #undef _FILE_OFFSET_BITS // Large file support; possibly archaic now? #undef _LARGE_FILES // "" #undef _LARGEFILE_SOURCE // "" /* Function behavior */ #define eslSTOPWATCH_HIGHRES #endif /*eslCONFIG_INCLUDED*/