use lightmotif::abc::Dna; use lightmotif_io::uniprobe; use std::io::Cursor; #[test] fn test_cha4() { const CHA4: &str = include_str!("Cha4.uniprobe"); let mut reader = uniprobe::Reader::<_, Dna>::new(Cursor::new(CHA4)); let record = reader.next().unwrap().unwrap(); assert_eq!( record.id(), "Gene: Cha4-primary Motif: A.CTCCGCC Enrichment Score: 0.49454064337413" ); assert!(reader.next().is_none()); } #[test] fn test_gal4() { const GAL4: &str = include_str!("Gal4.uniprobe"); let mut reader = uniprobe::Reader::<_, Dna>::new(Cursor::new(GAL4)); let record = reader.next().unwrap().unwrap(); assert_eq!( record.id(), "Gene: Gal4-primary Motif: TCGG...........CCGA Enrichment Score: 0.497820485249659" ); assert!(reader.next().is_none()); } #[test] fn test_demo() { const DEMO: &str = include_str!("demo.uniprobe"); let mut reader = uniprobe::Reader::<_, Dna>::new(Cursor::new(DEMO)); let r1 = reader.next().unwrap().unwrap(); assert_eq!(r1.id(), "Arid3a_primary"); assert_eq!(r1.matrix().matrix().rows(), 17); let r2 = reader.next().unwrap().unwrap(); assert_eq!(r2.id(), "Arid5a_primary"); assert_eq!(r2.matrix().matrix().rows(), 14); assert!(reader.next().is_none()); }