[package]
name = "lt-fm-index"
version = "0.7.0-alpha.3"
authors = ["baku4 <bahkhun@gmail.com>"]
edition = "2021"
rust-version = "1.57.0"
description = "Fm-index using k-mer lookup table for exact pattern matching"
readme = "README.md"
repository = "https://github.com/baku4/lt-fm-index/"
license = "MIT"
keywords = ["fm-index", "bwt", "pattern_matching", "bio"]
categories = ["science", "algorithms"]

[dependencies]
capwriter = "0.2.0"
byteorder = "1.5"
bytemuck = { version = "1.16", features = [ "derive" ] }
num-traits = "0.2.15"
bio = "1.6"
libdivsufsort-rs = { version = "0.1.3", optional = true }

[target.'cfg(target_arch = "wasm32")'.dependencies]
getrandom = { version = "0.2", features = ["js"] }

[dev-dependencies]
crate_fm_index = { package = "fm-index", version = "0.1" }
rand = "0.8.0"
criterion = "0.3.5"

[[bench]]
name = "benchmark"
harness = false

[features]
default = []
fastbwt = ["libdivsufsort-rs"]