# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2021"
name = "minimap2"
version = "0.1.22+minimap2.2.28"
authors = ["Joseph Guhlin <joseph.guhlin@gmail.com>"]
build = false
exclude = [
    "**/*.fasta",
    "*.profdata",
    "*.mmi",
    "**/*.mmi",
    "/minimap2-sys/",
    "/minimappers2/",
    "/fakeminimap2",
    "/test_data/",
    ".*",
]
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "Bindings to libminimap2"
readme = "README.md"
keywords = [
    "bioinformatics",
    "fasta",
    "alignment",
    "fastq",
]
categories = ["science"]
license = "MIT OR Apache-2.0"
repository = "https://github.com/jguhlin/minimap2-rs"

[package.metadata.docs.rs]
features = [
    "map-file",
    "htslib",
]

[lib]
name = "minimap2"
path = "src/lib.rs"

[[example]]
name = "channels"
path = "examples/channels.rs"
doc-scrape-examples = true

[[example]]
name = "rayon"
path = "examples/rayon.rs"
doc-scrape-examples = true

[dependencies.libc]
version = "0.2"

[dependencies.minimap2-sys]
version = "0.1.20+minimap2.2.28"

[dependencies.needletail]
version = "0.6"
optional = true
default-features = false

[dependencies.rust-htslib]
version = "0.48"
optional = true
default-features = false

[dev-dependencies.clap]
version = "4.5.21"
features = ["derive"]

[dev-dependencies.crossbeam]
version = "0.8.4"

[dev-dependencies.needletail]
version = "0.6"
default-features = false

[dev-dependencies.rayon]
version = "1.10"

[features]
curl = ["rust-htslib/curl"]
default = ["map-file"]
htslib = ["rust-htslib"]
map-file = ["needletail"]
simde = ["minimap2-sys/simde"]
sse2only = ["minimap2-sys/sse2only"]
static = [
    "minimap2-sys/static",
    "rust-htslib/static",
]
zlib-ng = ["minimap2-sys/zlib-ng"]