/*************************************************************************** * tests/algo/test_parallel_sort.cpp * * Part of the STXXL. See http://stxxl.sourceforge.net * * Copyright (C) 2007, 2009 Johannes Singler * Copyright (C) 2008, 2009 Andreas Beckmann * * Distributed under the Boost Software License, Version 1.0. * (See accompanying file LICENSE_1_0.txt or copy at * http://www.boost.org/LICENSE_1_0.txt) **************************************************************************/ //! \example algo/test_parallel_sort.cpp //! This is an example of how to use the parallelized sorting algorithm. //! Setting all the parameters in optional, just compiling with parallel mode //! suffices. #if !defined(STXXL_NOT_CONSIDER_SORT_MEMORY_OVERHEAD) #define STXXL_NOT_CONSIDER_SORT_MEMORY_OVERHEAD 0 #endif #include #include #include #include #include #include #include using stxxl::unsigned_type; const unsigned long long megabyte = 1024 * 1024; const int block_size = STXXL_DEFAULT_BLOCK_SIZE(my_type); #define RECORD_SIZE 20 #define MAGIC 123 unsigned_type run_size; unsigned_type buffer_size; struct my_type { typedef unsigned long long key_type; key_type m_key; key_type m_load; char m_data[RECORD_SIZE - 2 * sizeof(key_type)]; key_type key() const { return m_key; } my_type() { } my_type(key_type k) : m_key(k) { } my_type(key_type k, key_type l) : m_key(k), m_load(l) { } void operator = (const key_type& k) { m_key = k; } void operator = (const my_type& mt) { m_key = mt.m_key; m_load = mt.m_load; } }; bool operator < (const my_type& a, const my_type& b); inline bool operator < (const my_type& a, const my_type& b) { return a.key() < b.key(); } inline bool operator == (const my_type& a, const my_type& b) { return a.key() == b.key(); } inline std::ostream& operator << (std::ostream& o, const my_type& obj) { o << obj.m_key << "/" << obj.m_load; return o; } struct cmp_less_key : public std::less { my_type min_value() const { return my_type(std::numeric_limits::min(), MAGIC); } my_type max_value() const { return my_type(std::numeric_limits::max(), MAGIC); } }; typedef stxxl::vector, block_size, STXXL_DEFAULT_ALLOC_STRATEGY> vector_type; unsigned_type checksum(vector_type& input) { unsigned_type sum = 0; for (vector_type::const_iterator i = input.begin(); i != input.end(); ++i) sum += (unsigned_type)((*i).m_key); return sum; } void linear_sort_normal(vector_type& input) { unsigned_type sum1 = checksum(input); stxxl::stats_data stats_begin(*stxxl::stats::get_instance()); double start = stxxl::timestamp(); stxxl::sort(input.begin(), input.end(), cmp_less_key(), run_size); double stop = stxxl::timestamp(); std::cout << stxxl::stats_data(*stxxl::stats::get_instance()) - stats_begin; unsigned_type sum2 = checksum(input); std::cout << sum1 << " ?= " << sum2 << std::endl; STXXL_CHECK(stxxl::is_sorted(input.begin(), input.end())); std::cout << "Linear sorting normal took " << (stop - start) << " seconds." << std::endl; } void linear_sort_streamed(vector_type& input, vector_type& output) { unsigned_type sum1 = checksum(input); stxxl::stats_data stats_begin(*stxxl::stats::get_instance()); double start = stxxl::timestamp(); typedef stxxl::stream::streamify_traits::stream_type input_stream_type; input_stream_type input_stream = stxxl::stream::streamify(input.begin(), input.end()); typedef cmp_less_key comparator_type; comparator_type cl; typedef stxxl::stream::sort sort_stream_type; sort_stream_type sort_stream(input_stream, cl, run_size); vector_type::iterator o = stxxl::stream::materialize(sort_stream, output.begin(), output.end()); STXXL_CHECK(o == output.end()); double stop = stxxl::timestamp(); std::cout << stxxl::stats_data(*stxxl::stats::get_instance()) - stats_begin; unsigned_type sum2 = checksum(output); std::cout << sum1 << " ?= " << sum2 << std::endl; if (sum1 != sum2) STXXL_MSG("WRONG DATA"); STXXL_CHECK(stxxl::is_sorted(output.begin(), output.end(), comparator_type())); std::cout << "Linear sorting streamed took " << (stop - start) << " seconds." << std::endl; } int main(int argc, const char** argv) { if (argc < 6) { std::cout << "Usage: " << argv[0] << " [n in MiB] [p threads] [M in MiB] [sorting algorithm: m | q | qb | s] [merging algorithm: p | s | n]" << std::endl; return -1; } stxxl::config::get_instance(); #if STXXL_PARALLEL_MULTIWAY_MERGE STXXL_MSG("STXXL_PARALLEL_MULTIWAY_MERGE"); #endif unsigned long megabytes_to_process = atoi(argv[1]); int p = atoi(argv[2]); unsigned_type memory_to_use = (unsigned_type)(atoi(argv[3]) * megabyte); run_size = memory_to_use; buffer_size = memory_to_use / 16; #ifdef STXXL_PARALLEL_MODE omp_set_num_threads(p); __gnu_parallel::_Settings parallel_settings(__gnu_parallel::_Settings::get()); parallel_settings.merge_splitting = __gnu_parallel::EXACT; parallel_settings.merge_minimal_n = 10000; parallel_settings.merge_oversampling = 10; parallel_settings.multiway_merge_algorithm = __gnu_parallel::LOSER_TREE; parallel_settings.multiway_merge_splitting = __gnu_parallel::EXACT; parallel_settings.multiway_merge_oversampling = 10; parallel_settings.multiway_merge_minimal_n = 10000; parallel_settings.multiway_merge_minimal_k = 2; if (!strcmp(argv[4], "q")) //quicksort parallel_settings.sort_algorithm = __gnu_parallel::QS; else if (!strcmp(argv[4], "qb")) //balanced quicksort parallel_settings.sort_algorithm = __gnu_parallel::QS_BALANCED; else if (!strcmp(argv[4], "m")) //merge sort parallel_settings.sort_algorithm = __gnu_parallel::MWMS; else /*if(!strcmp(argv[4], "s"))*/ //sequential (default) { parallel_settings.sort_algorithm = __gnu_parallel::QS; parallel_settings.sort_minimal_n = memory_to_use; } if (!strcmp(argv[5], "p")) //parallel { stxxl::SETTINGS::native_merge = false; //parallel_settings.multiway_merge_minimal_n = 1024; //leave as default } else if (!strcmp(argv[5], "s")) //sequential { stxxl::SETTINGS::native_merge = false; parallel_settings.multiway_merge_minimal_n = memory_to_use; //too much to be called } else /*if(!strcmp(argv[5], "n"))*/ //native (default) stxxl::SETTINGS::native_merge = true; parallel_settings.multiway_merge_minimal_k = 2; __gnu_parallel::_Settings::set(parallel_settings); STXXL_CHECK(&__gnu_parallel::_Settings::get() != ¶llel_settings); if (0) printf("%d %p: mwms %d, q %d, qb %d", __gnu_parallel::_Settings::get().sort_algorithm, (void*)&__gnu_parallel::_Settings::get().sort_algorithm, __gnu_parallel::MWMS, __gnu_parallel::QS, __gnu_parallel::QS_BALANCED); #endif std::cout << "Sorting " << megabytes_to_process << " MiB of data (" << (megabytes_to_process * megabyte / sizeof(my_type)) << " elements) using " << (memory_to_use / megabyte) << " MiB of internal memory and " << p << " thread(s), block size " << block_size << ", element size " << sizeof(my_type) << std::endl; const stxxl::int64 n_records = stxxl::int64(megabytes_to_process) * stxxl::int64(megabyte) / sizeof(my_type); vector_type input(n_records); stxxl::stats_data stats_begin(*stxxl::stats::get_instance()); double generate_start = stxxl::timestamp(); stxxl::generate(input.begin(), input.end(), stxxl::random_number64(), memory_to_use / STXXL_DEFAULT_BLOCK_SIZE(my_type)); double generate_stop = stxxl::timestamp(); std::cout << stxxl::stats_data(*stxxl::stats::get_instance()) - stats_begin; std::cout << "Generating took " << (generate_stop - generate_start) << " seconds." << std::endl; STXXL_CHECK(!stxxl::is_sorted(input.begin(), input.end())); { vector_type output(n_records); linear_sort_streamed(input, output); linear_sort_normal(input); } return 0; } // vim: et:ts=4:sw=4