[package]
name = "mudskipper"
version = "0.1.0"
edition = "2018"
license-file = "LICENSE"
description = "Convert genomic alignments to transcriptomic BAM/RAD files."
homepage = "https://github.com/OceanGenomics/mudskipper"
repository = "https://github.com/OceanGenomics/mudskipper"
readme = "README.md"

# See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html

[dependencies]
rust-htslib = { version="0.38.2", default-features = false, features=["bzip2", "lzma", "serde_feature"] }
bio = "0.39.1"
bio-types = "0.12.1"
coitrees = "0.2.1"
# for coitrees
fnv = "1.0.7"
log = "0.4.14"
env_logger = "0.9.0"
indicatif = "0.16.2"
linecount = "0.1.0"
num_cpus = "1.13.0"
libradicl = "=0.4.1"
clap = "~2.34.0"