use std::io::{Seek, SeekFrom, Write}; use assert_cmd::prelude::*; use predicates::str::contains; #[cfg(feature = "compression")] #[test] fn test_stdin_gz() { // Generated with `echo ">id1\nAGTCGTCA" | gzip -c | xxd -i` let input: &[u8] = &[ 0x1f, 0x8b, 0x08, 0x00, 0x00, 0x00, 0x00, 0x00, 0x00, 0x03, 0xb3, 0xcb, 0x4c, 0x31, 0xe4, 0x72, 0x74, 0x0f, 0x71, 0x06, 0x22, 0x47, 0x2e, 0x00, 0x9e, 0x3a, 0x32, 0x8c, 0x0e, 0x00, 0x00, 0x00, ]; let mut file = tempfile::NamedTempFile::new().unwrap(); file.write_all(input).unwrap(); file.flush().unwrap(); file.seek(SeekFrom::Start(0)).unwrap(); escargot::CargoBuild::new() .example("stdin_pipe") .current_release() .current_target() .run() .unwrap() .command() .stdin(file.into_file()) .assert() .success() .stdout(contains("There are 8 bases in your file")) .stdout(contains("There are 0 AAAAs in your file")); } #[cfg(feature = "compression")] #[test] fn test_stdin_xz() { // Generated with `echo ">id1\nAGTCGTCA" | xz -c | xxd -i` let input: &[u8] = &[ 0xfd, 0x37, 0x7a, 0x58, 0x5a, 0x00, 0x00, 0x04, 0xe6, 0xd6, 0xb4, 0x46, 0x02, 0x00, 0x21, 0x01, 0x16, 0x00, 0x00, 0x00, 0x74, 0x2f, 0xe5, 0xa3, 0x01, 0x00, 0x0d, 0x3e, 0x69, 0x64, 0x31, 0x0a, 0x41, 0x47, 0x54, 0x43, 0x47, 0x54, 0x43, 0x41, 0x0a, 0x00, 0x00, 0x00, 0x12, 0x0f, 0x91, 0x75, 0xef, 0x7b, 0x63, 0x17, 0x00, 0x01, 0x26, 0x0e, 0x08, 0x1b, 0xe0, 0x04, 0x1f, 0xb6, 0xf3, 0x7d, 0x01, 0x00, 0x00, 0x00, 0x00, 0x04, 0x59, 0x5a, ]; let mut file = tempfile::NamedTempFile::new().unwrap(); file.write_all(input).unwrap(); file.flush().unwrap(); file.seek(SeekFrom::Start(0)).unwrap(); escargot::CargoBuild::new() .example("stdin_pipe") .current_release() .current_target() .run() .unwrap() .command() .stdin(file.into_file()) .assert() .success() .stdout(contains("There are 8 bases in your file")) .stdout(contains("There are 0 AAAAs in your file")); } #[cfg(feature = "compression")] #[test] fn test_stdin_bzip() { // Generated with `echo ">id1\nAGTCGTCA" | bzip2 -c | xxd -i` let input: &[u8] = &[ 0x42, 0x5a, 0x68, 0x39, 0x31, 0x41, 0x59, 0x26, 0x53, 0x59, 0x9f, 0x9d, 0xf9, 0xa2, 0x00, 0x00, 0x01, 0xcf, 0x00, 0x00, 0x10, 0x20, 0x01, 0x28, 0x80, 0x04, 0x00, 0x04, 0x20, 0x20, 0x00, 0x22, 0x0c, 0x9a, 0x64, 0x20, 0xc9, 0x88, 0x21, 0x95, 0x8e, 0x82, 0x75, 0x27, 0x8b, 0xb9, 0x22, 0x9c, 0x28, 0x48, 0x4f, 0xce, 0xfc, 0xd1, 0x00, ]; let mut file = tempfile::NamedTempFile::new().unwrap(); file.write_all(input).unwrap(); file.flush().unwrap(); file.seek(SeekFrom::Start(0)).unwrap(); escargot::CargoBuild::new() .example("stdin_pipe") .current_release() .current_target() .run() .unwrap() .command() .stdin(file.into_file()) .assert() .success() .stdout(contains("There are 8 bases in your file")) .stdout(contains("There are 0 AAAAs in your file")); } #[cfg(feature = "compression")] #[test] fn test_stdin_zstd() { // Generated with `echo ">id1\nAGTCGTCA" | zstd -c | xxd -i` let input: &[u8] = &[ 0x28, 0xb5, 0x2f, 0xfd, 0x04, 0x58, 0x71, 0x00, 0x00, 0x3e, 0x69, 0x64, 0x31, 0x0a, 0x41, 0x47, 0x54, 0x43, 0x47, 0x54, 0x43, 0x41, 0x0a, 0x52, 0x9d, 0x37, 0x8d, ]; let mut file = tempfile::NamedTempFile::new().unwrap(); file.write_all(input).unwrap(); file.flush().unwrap(); file.seek(SeekFrom::Start(0)).unwrap(); escargot::CargoBuild::new() .example("stdin_pipe") .current_release() .current_target() .run() .unwrap() .command() .stdin(file.into_file()) .assert() .success() .stdout(contains("There are 8 bases in your file")) .stdout(contains("There are 0 AAAAs in your file")); } #[test] fn test_stdin_no_compression() { let input: &[u8] = b">id1\nAGTCGTCA"; let mut file = tempfile::NamedTempFile::new().unwrap(); file.write_all(input).unwrap(); file.flush().unwrap(); file.seek(SeekFrom::Start(0)).unwrap(); escargot::CargoBuild::new() .example("stdin_pipe") .current_release() .current_target() .run() .unwrap() .command() .stdin(file.into_file()) .assert() .success() .stdout(contains("There are 8 bases in your file")) .stdout(contains("There are 0 AAAAs in your file")); }