/* -------------------------------------------------------------------------- * * OpenMMAmoeba * * -------------------------------------------------------------------------- * * This is part of the OpenMM molecular simulation toolkit originating from * * Simbios, the NIH National Center for Physics-Based Simulation of * * Biological Structures at Stanford, funded under the NIH Roadmap for * * Medical Research, grant U54 GM072970. See https://simtk.org. * * * * Portions copyright (c) 2010-2016 Stanford University and the Authors. * * Authors: Peter Eastman * * Contributors: * * * * Permission is hereby granted, free of charge, to any person obtaining a * * copy of this software and associated documentation files (the "Software"), * * to deal in the Software without restriction, including without limitation * * the rights to use, copy, modify, merge, publish, distribute, sublicense, * * and/or sell copies of the Software, and to permit persons to whom the * * Software is furnished to do so, subject to the following conditions: * * * * The above copyright notice and this permission notice shall be included in * * all copies or substantial portions of the Software. * * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL * * THE AUTHORS, CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, * * DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR * * OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE * * USE OR OTHER DEALINGS IN THE SOFTWARE. * * -------------------------------------------------------------------------- */ #include "openmm/Platform.h" #include "openmm/internal/AssertionUtilities.h" #include "openmm/AmoebaWcaDispersionForce.h" #include "openmm/serialization/XmlSerializer.h" #include #include using namespace OpenMM; using namespace std; extern "C" void registerAmoebaSerializationProxies(); void testSerialization() { // Create a Force. AmoebaWcaDispersionForce force1; force1.setForceGroup(3); force1.setEpso( 1.0); force1.setEpsh( 1.1); force1.setRmino( 1.2); force1.setRminh( 1.3); force1.setAwater( 1.4); force1.setShctd( 1.5); force1.setDispoff(1.6); force1.setSlevy( 1.7); force1.addParticle(1.0, 2.0); force1.addParticle(1.1, 2.1); force1.addParticle(1.2, 2.2); // Serialize and then deserialize it. stringstream buffer; XmlSerializer::serialize(&force1, "Force", buffer); AmoebaWcaDispersionForce* copy = XmlSerializer::deserialize(buffer); // Compare the two forces to see if they are identical. AmoebaWcaDispersionForce& force2 = *copy; ASSERT_EQUAL(force1.getForceGroup(), force2.getForceGroup()); ASSERT_EQUAL(force1.getEpso(), force2.getEpso()); ASSERT_EQUAL(force1.getEpsh(), force2.getEpsh()); ASSERT_EQUAL(force1.getRmino(), force2.getRmino()); ASSERT_EQUAL(force1.getRminh(), force2.getRminh()); ASSERT_EQUAL(force1.getAwater(), force2.getAwater()); ASSERT_EQUAL(force1.getShctd(), force2.getShctd()); ASSERT_EQUAL(force1.getDispoff(), force2.getDispoff()); ASSERT_EQUAL(force1.getSlevy(), force2.getSlevy()); ASSERT_EQUAL(force1.getNumParticles(), force2.getNumParticles()); for (unsigned int ii = 0; ii < static_cast(force1.getNumParticles()); ii++) { double radius1, epsilon1; double radius2, epsilon2; force1.getParticleParameters(ii, radius1, epsilon1); force2.getParticleParameters(ii, radius2, epsilon2); ASSERT_EQUAL(radius1, radius2); ASSERT_EQUAL(epsilon1, epsilon2); } } int main() { try { registerAmoebaSerializationProxies(); testSerialization(); } catch(const exception& e) { cout << "exception: " << e.what() << endl; return 1; } cout << "Done" << endl; return 0; }