/* -------------------------------------------------------------------------- * * OpenMMDrude * * -------------------------------------------------------------------------- * * This is part of the OpenMM molecular simulation toolkit originating from * * Simbios, the NIH National Center for Physics-Based Simulation of * * Biological Structures at Stanford, funded under the NIH Roadmap for * * Medical Research, grant U54 GM072970. See https://simtk.org. * * * * Portions copyright (c) 2013 Stanford University and the Authors. * * Authors: Peter Eastman * * Contributors: * * * * Permission is hereby granted, free of charge, to any person obtaining a * * copy of this software and associated documentation files (the "Software"), * * to deal in the Software without restriction, including without limitation * * the rights to use, copy, modify, merge, publish, distribute, sublicense, * * and/or sell copies of the Software, and to permit persons to whom the * * Software is furnished to do so, subject to the following conditions: * * * * The above copyright notice and this permission notice shall be included in * * all copies or substantial portions of the Software. * * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL * * THE AUTHORS, CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, * * DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR * * OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE * * USE OR OTHER DEALINGS IN THE SOFTWARE. * * -------------------------------------------------------------------------- */ #include "openmm/Platform.h" #include "openmm/internal/AssertionUtilities.h" #include "openmm/DrudeForce.h" #include "openmm/serialization/XmlSerializer.h" #include #include using namespace OpenMM; using namespace std; extern "C" void registerDrudeSerializationProxies(); void testSerialization() { // Create a Force. DrudeForce force1; force1.addParticle(0, 1, 2, 3, 4, 0.5, 1.0, 1.5, 2.0); force1.addParticle(2, 3, 7, 8, 9, 0.1, 1e-4, 1.0, 0.9); force1.addParticle(5, 6, -1, -1, -1, 0.2, 0.1, 1.0, 1.0); force1.addScreenedPair(0, 1, 2.6); force1.addScreenedPair(1, 2, 2.2); // Serialize and then deserialize it. stringstream buffer; XmlSerializer::serialize(&force1, "Force", buffer); DrudeForce* copy = XmlSerializer::deserialize(buffer); // Compare the two forces to see if they are identical. DrudeForce& force2 = *copy; ASSERT_EQUAL(force1.getNumParticles(), force2.getNumParticles()); for (int i = 0; i < (int) force1.getNumParticles(); i++) { int a1, a2, a3, a4, a5, b1, b2, b3, b4, b5; double charge1, charge2; double polar1, polar2; double aa12, ba12, aa34, ba34; force1.getParticleParameters(i, a1, a2, a3, a4, a5, charge1, polar1, aa12, aa34); force2.getParticleParameters(i, b1, b2, b3, b4, b5, charge2, polar2, ba12, ba34); ASSERT_EQUAL(a1, b1); ASSERT_EQUAL(a2, b2); ASSERT_EQUAL(a3, b3); ASSERT_EQUAL(a4, b4); ASSERT_EQUAL(a5, b5); ASSERT_EQUAL(charge1, charge2); ASSERT_EQUAL(polar1, polar2); ASSERT_EQUAL(aa12, ba12); ASSERT_EQUAL(aa34, ba34); } ASSERT_EQUAL(force1.getNumScreenedPairs(), force2.getNumScreenedPairs()); for (int i = 0; i < (int) force1.getNumScreenedPairs(); i++) { int a1, a2, b1, b2; double thole1, thole2; force1.getScreenedPairParameters(i, a1, a2, thole1); force1.getScreenedPairParameters(i, b1, b2, thole2); ASSERT_EQUAL(a1, b1); ASSERT_EQUAL(a2, b2); ASSERT_EQUAL(thole1, thole2); } } int main() { try { registerDrudeSerializationProxies(); testSerialization(); } catch(const exception& e) { cout << "exception: " << e.what() << endl; return 1; } cout << "Done" << endl; return 0; }