CLUSTAL X (1.81) multiple sequence alignment


AE006468.1/4442059-4441898          AAAAGACAUCAGCAUCCGUAUAAUCUGAAAAUAACGCAGAGUGAUUUUCU
CP000880.1/3390394-3390555          AAAAGAAGGCGACAUCCGUAUAAUCUGAAAAUAACGCAGAGUGAUUUUCU
CP000822.1/3621029-3621187          ---AACAUUCAUUAUCCGUAUACUCUGAAAAUAACACCGAGUAACUUACG
CP000653.1/275300-275142            AACAACGUUCACACUCCGUAUUUUCCUAAAAAAACCCGCAGUAAUUAACG
BABF01004542.1/437-592              AACACAAUACCCGGU-----AAAUCUGAAAAUAUCAGAAACAGGAUAAC-
ACDJ01000044.1/32607-32447          AUUAAAAUGCAAUAUCCGGUAAAUCCGAAAACAUCAGAAAUUGAAUAACA
BAAW01001217.1/1598-1438            AUAAAAACACAAUACCCGGUAAAUCUGAAAAUAUCAGAAACAGGAUAAC-

AE006468.1/4442059-4441898          GGUUAUUGC--U-UAUUUUAGGAUUAAGCUCAAUAUAAAACUGUGGGGAU
CP000880.1/3390394-3390555          GGUUAUUGG--U-UAUUUUAGGAUUAAGCUCAAUAUAAAAUUAUAGGGGA
CP000822.1/3621029-3621187          GGUUAUUCA--U-UAUUUUAGGAUUAAGCUCAAUAUAAAUUUUUGCGGAA
CP000653.1/275300-275142            GGGAAAUCA--G-GCUUUUCGGAUUAAACUCAUAAUAGAAAUUUGCGUCA
BABF01004542.1/437-592              GUUGAAUAA--AUUAUUUUAGGAUUAAGCUCAAU-UAAAGGGUGAAGUAA
ACDJ01000044.1/32607-32447          --UUAAUAAAAU-UAUUUUAGGAUUAAGCUCAAUUAAGGUAUG-AAGUUA
BAAW01001217.1/1598-1438            GUUGAAUAA--AUUAUUUUAGGAUUAAGCUCAAU-UAAAGGGUGAAGUAA

AE006468.1/4442059-4441898          AAAGACGGACAAGC-GGAAUUAUCUUAUAAAAAAAGCCGAUGUGAAUAUC
CP000880.1/3390394-3390555          AAAGACGGACAAGC-GGAAUUAUCUUAUAAAAAAAGCCGAUGUGAAUAUC
CP000822.1/3621029-3621187          UAGCACAGACAACC-GGAAUUAUCUUAUAAAAAAAGCCGAUAAUAAUAUC
CP000653.1/275300-275142            GGUAACGGACAACC-GGAAUUAUCCGAUAAAAAAUGCCAGCAUUU-CGCC
BABF01004542.1/437-592              AAACAUAAAUAUCCUGGAGUAAUCUUAUAAA-AAAGCCGAUAUUAAUAUC
ACDJ01000044.1/32607-32447          AAACGUAGAUAUCCUGGAGCAUUCUUAUA-AAAAAGCCGAUAUUAAUAUC
BAAW01001217.1/1598-1438            AAACGUAGAUAUCCUGGAGUAAUCUUAUAAA-AAAGCCGAUAUUAAUAUC

AE006468.1/4442059-4441898          GGCCUUUUUAUUAUCU
CP000880.1/3390394-3390555          GGCUUUUUUAUUAUCU
CP000822.1/3621029-3621187          GGCUCUAAUUACAGAU
CP000653.1/275300-275142            GGCAUGUAUUACGG--
BABF01004542.1/437-592              GGCUUUUUUAUUUCAU
ACDJ01000044.1/32607-32447          GGCUUUUUAUUUCAUU
BAAW01001217.1/1598-1438            GGCUUUUUUAUUUCAU