CLUSTAL X (1.81) multiple sequence alignment


AAGE02001172.1/33036-33136          UAAUGGUUCUGGUGCGAACGGACGAUAGUCUUCAGCGGCCGUGCAUUUGA
AAWU01001740.1/43930-44034          UUCUGGUCUUGGUGCGGACGGACGAUAGUCUUCAGCGACCGUGCCAU-UU
AANI01014820.1/6361-6262            UUUAUGGUACGGUGCGACCGGAUGAUGGUUCACAACGACCGUGCAUA-CU
AAAB01008986.1/7850728-7850827      UAUACGGUACGGUACGGACGGACGAUAGUCUUCAACGACCGUUCCGU-UU
AADE01012656.1/560-657              GUAAUGGUACGGUGCGACCGGACGAUGGUUCACAACGACCGUGUCUC-UU
AAQB01007950.1/807758-807661        GUAAUGGUACGGUGCGACCGGAUGACGGUUCACAACGACCGUGUCAA-UU
AAPU01010248.1/305747-305847        UUUAUGGUACGGUGCGACCGGAUGAUGGUUCACAACGACCGUACAGUUUU
AAPT01020762.1/231816-231717        CUGAUGGUACGGUGCGACCGGAUGACGGUUCACAACGACCGUGCUUA-UU
JN211059.1/1988-2085                GUAAUGGUACGGUGCGACCGGAUGAUGGUUCACAACGACCGUGUCAU-UU

AAGE02001172.1/33036-33136          UAGA-----AUUGGUCGGUGGGACUUUCGUCCGUUUGUAACCGCCGUUUG
AAWU01001740.1/43930-44034          GAAAACCCUUUGGGUCGGUGGGACUUUCGUCCGUUUGUAACCGCCAGUUG
AANI01014820.1/6361-6262            UUUA-----ACUGGUCGGUGGGACUUUCGUCCGUUUGUAACGCCAUUUGU
AAAB01008986.1/7850728-7850827      GACA-----CGAGGUCGGUGGGACUUUCGUCCGUUUGUAAGGCCAGCUGC
AADE01012656.1/560-657              AAA------CU-GGUCGGUGGGACUUUCGUCCGUUUGUAACGCCAUUUGU
AAQB01007950.1/807758-807661        UUA------CU-GGUCGGUGGGACUUUCGUCCGUUUGUAACGCCAUUUGU
AAPU01010248.1/305747-305847        UUCA-----ACGGGUCGGUGGGACUUUCGUCCGUUUGUAACGCCAUUUGU
AAPT01020762.1/231816-231717        UUUA-----ACUGGUCGGUGGGACUUUCGUCCGUUUGUAACGCCAUUUGU
JN211059.1/1988-2085                AAA-------CGGGUCGGUGGGACUUUCGUCCGUUUGUAACGCCAUUUGU

AAGE02001172.1/33036-33136          CGACGA
AAWU01001740.1/43930-44034          CAACGA
AANI01014820.1/6361-6262            CAACGA
AAAB01008986.1/7850728-7850827      AUCGAG
AADE01012656.1/560-657              CAGCGA
AAQB01007950.1/807758-807661        CAACGA
AAPU01010248.1/305747-305847        CAACGA
AAPT01020762.1/231816-231717        CAGCGA
JN211059.1/1988-2085                CAACGA