pilercr v1.06 By Robert C. Edgar /stor/work/Wilke/rybarskj/final-mempads/data/tacc-datasets/batch0043/chunk004317.fna: 21 putative CRISPR arrays found. DETAIL REPORT Array 1 >MGYG000166779_43 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ==================================== ====== 4 36 100.0 30 CCG .................................... ACGGGTGCACTTTCGATGTCGCACTTTTTG 70 36 100.0 29 GCACTTTTTG .................................... TATACATCATCGTACATATAAGCATACAG 135 36 100.0 29 AAGCATACAG .................................... GAAAAATCAGAGCCCAAAGTACGAGTAAC 200 36 100.0 29 TACGAGTAAC .................................... CCAGTTCCCGAATTTGATGCTCTTGGCAT 265 36 100.0 29 CTCTTGGCAT .................................... ACTTACAACAACAACAATAACAATAAATG 330 36 100.0 30 ACAATAAATG .................................... ATACGTGTGCTCTATATACGCACCCATTGG 396 36 100.0 30 CACCCATTGG .................................... GGAGCTCTTTCGATGTCGCACTTTCTGAAG 462 36 100.0 29 CTTTCTGAAG .................................... CGTGCTCGCTTTGAATTTGTAGAACCCGA 527 36 100.0 30 TAGAACCCGA .................................... TCTCGACACTATTTCTAACGAGGAAATTAA 593 36 100.0 29 AGGAAATTAA .................................... GCGCTGAGAAGTTACCACCGACCGCTTGA 658 36 100.0 29 GACCGCTTGA .................................... AATACTAAACCAAGATTGCCAAAGGTCCA 723 36 100.0 29 CAAAGGTCCA .................................... AGATGATCTACGCTCAATATTAGAAAAAC 788 36 100.0 30 TTAGAAAAAC .................................... GTATCTGCGGAACAAGTACAGAGAACATGA 854 36 100.0 30 GAGAACATGA .................................... CGAACCTAATACGGCTTTAGCCTTTTTGCA 920 36 100.0 30 CCTTTTTGCA .................................... AATGAGTACCAAAAGCAAAGAACAAATCGA 986 36 100.0 30 AACAAATCGA .................................... TATATTTTTGTGCGTTACCCGTCCGTGAGG 1052 36 100.0 29 GTCCGTGAGG .................................... TTACTTACGACTATTACGACCAGGTGAAC 1117 36 100.0 29 CCAGGTGAAC .................................... ATAATTATAATCGGAAATCAAGCGGATAA 1182 36 100.0 29 AAGCGGATAA .................................... TTTGAATTAGATTCGGCAACCTTAGCATT 1247 36 100.0 29 CCTTAGCATT .................................... TTTTCATCATATTCATAAGAATAGCGACC 1312 36 100.0 30 AATAGCGACC .................................... CCATACGCTCCTTGGTGGTCTTGGTAAGGA 1378 36 94.4 TTGGTAAGGA .................A..........C....... TTTTGTGGCT ========== ====== ====== ====== ========== ==================================== 22 36 29 GTTGTGGTTTGATGTAGGAATCAAAAGATATACAAC Array 2 >MGYG000242676_4 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ==================================== ====== 60549 36 94.4 29 TTTGATTCGG ..........................G.C....... TTGTTCTTTTATATGTGTACATAGCTAGA 60614 36 100.0 28 CATAGCTAGA .................................... ACCTCCTTTGGATTTTCAGCAAATCAGG 60678 36 97.2 26 GCAAATCAGG .............................T...... ATACTGCTTGTTCTGTAAAAATTTTG 60740 36 94.4 26 AAAAATTTTG .........T.........................G GAGTTCTCCAACCGTTTGCGGCAATA 60802 36 100.0 27 TGCGGCAATA .................................... ACGGTTGAATCAATGAGAAATGTTGTG 60865 36 100.0 27 AAATGTTGTG .................................... TGATATTGACGGTGACCTGATTAACCG 60928 36 100.0 TGATTAACCG .................................... TGTCAATCACATCTGTGACCGCAAGG ========== ====== ====== ====== ========== ==================================== 7 36 27 TTTAATAACCCTATATAATTTCTACTATTGTAGATA Array 3 >MGYG000242676_4 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ==================================== ====== 157550 36 100.0 30 AATCGTGTTG .................................... GAGGGGTTGTCCTTCATGTACTCTTTACCT 157616 36 100.0 30 CTCTTTACCT .................................... ATACAAATGCATTGCCGAGGACAGTGTTTT 157682 36 100.0 30 ACAGTGTTTT .................................... TATACGGTTTGCCCGTGCAGTCTTGTACAA 157748 36 100.0 30 TCTTGTACAA .................................... GGGCTTATACTCTGACTTTCAACAAGTTAG 157814 36 100.0 30 AACAAGTTAG .................................... CCGATTTTTTCATTGCCAAAACGATATTTT 157880 36 100.0 ACGATATTTT .................................... CTCAAATTG ========== ====== ====== ====== ========== ==================================== 6 36 30 GTTTTACTACCTTATAGATTTACACTATTCTCAAAC Array 4 >MGYG000273829_14 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ==================================== ====== 15191 36 100.0 30 ATACATTGTA .................................... ATCGCTGAACCTACAACAGACGCAAGAACA 15257 36 100.0 30 CGCAAGAACA .................................... GATATTGTCATACCTAAGTAAATAGGTGCG 15323 36 100.0 30 AATAGGTGCG .................................... TACAATCAGTCTATAACATTTGCAACTACG 15389 36 100.0 29 TGCAACTACG .................................... TATTATAGACAGCAAGCAACTTGATGTAT 15454 36 100.0 30 CTTGATGTAT .................................... CTTGAATTTGGGGAGATGTTCTCAGCTGGT 15520 36 100.0 30 CTCAGCTGGT .................................... AAAGTTTGCTGACAGGGACATTCAAAGCCG 15586 36 100.0 30 TTCAAAGCCG .................................... AAACCTGTCTGTCCGATCTGCACCATATAT 15652 36 100.0 30 CACCATATAT .................................... ACCGCTATTGCGCTGCAGCATCCACAAGGA 15718 36 100.0 30 TCCACAAGGA .................................... GCATCTTCCTGCGCTCTCTCTGAAAACATG 15784 36 100.0 30 TGAAAACATG .................................... CGAAGCCTAAAGCTCATTTCGCTTAGGCTT 15850 36 100.0 30 GCTTAGGCTT .................................... AAACATGGTGTTGATGTCAAAGAGCTGTAT 15916 36 100.0 30 AGAGCTGTAT .................................... TGGGCGAATATAAATTCCATCGGTGGCAAG 15982 36 100.0 30 CGGTGGCAAG .................................... AATATTGGATGATGTGTATGGCATTTTACT 16048 36 100.0 30 GCATTTTACT .................................... AGTGTATATGTGAACCCTGCTCCCAGTGCT 16114 36 100.0 30 TCCCAGTGCT .................................... AAAGACCGGAGCAAAGATGTCCGGGAGCCG 16180 36 100.0 30 CCGGGAGCCG .................................... TGAAAGTGGTGTAATTGTTATAACTCATTG 16246 36 100.0 30 TAACTCATTG .................................... AGACAACAGGTGTGGAAGCATATGTCTTTA 16312 36 100.0 30 TATGTCTTTA .................................... TGCTGCATAGGTGTGTATTTTCTCATGTCG 16378 36 100.0 30 TCTCATGTCG .................................... GGTAATGGTGGTGGCGGTTATACCGCAACT 16444 36 100.0 30 TACCGCAACT .................................... ATGGTCGGGGCTACATATTACGCCGCAGTA 16510 36 100.0 624 CGCCGCAGTA .................................... CGTGAGGTCTCCGACCGTGAAAACAGTTCTGCTGTAGTTCCCGGTTATTACTTGGTATGTTATAATACGAACTTAGTACCCTTTTCTGGGCGGCATGCTGTAGTTCCCGGTTATTACTTGGTATGTTATAATCCGCAGGTGCTACCGCTGTTATACTCTGTTGCTGTAGTTCCCGGTTATTACTTGGTATGTTATAATCGTAAATCGTTGGCGAAACGCTACCAACTGGCTGTAGTTCCCGGTTATTACTTGGTATGTTATAATCCTCGGTCTGCTCTAACAGATCCCCCAAGTGCTGTAGTTCCCGGTTATTACTTGGTATGTTATAATACAGAGAAAGAAAGAGAGATTAACGACTACGCTGTAGTTCCCGGTTATTACTTGGTATGTTATAATTGAAACGGAGTGGACAGGTAAAGGAATGGGGCTGTAGTTCCCGGTTATTACTTGGTATGTTATAATTGCGGTCCCTTGGTTCCGTCAACAACATCAGCTGTAGTTCCCGGTTATTACTTGGTATGTTATAATTGTCCTATTCCCTTTTATGCTGCGTGTATAGCTGTAGTTCCCGGTTATTACTTGGTATGTTATAATAATACAAGCATAAAGAACGAACCGCAACGG 17170 36 100.0 ACCGCAACGG .................................... AGGGAACGGT ========== ====== ====== ====== ========== ==================================== 22 36 58 GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT Array 5 >MGYG000273829_14 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ==================================== ====== 16576 36 100.0 30 AAACAGTTCT .................................... ACGAACTTAGTACCCTTTTCTGGGCGGCAT 16642 36 100.0 30 TGGGCGGCAT .................................... CCGCAGGTGCTACCGCTGTTATACTCTGTT 16708 36 100.0 30 ATACTCTGTT .................................... CGTAAATCGTTGGCGAAACGCTACCAACTG 16774 36 100.0 30 CTACCAACTG .................................... CCTCGGTCTGCTCTAACAGATCCCCCAAGT 16840 36 100.0 30 TCCCCCAAGT .................................... ACAGAGAAAGAAAGAGAGATTAACGACTAC 16906 36 100.0 30 TAACGACTAC .................................... TGAAACGGAGTGGACAGGTAAAGGAATGGG 16972 36 100.0 30 AAGGAATGGG .................................... TGCGGTCCCTTGGTTCCGTCAACAACATCA 17038 36 100.0 30 AACAACATCA .................................... TGTCCTATTCCCTTTTATGCTGCGTGTATA 17104 36 100.0 30 TGCGTGTATA .................................... AATACAAGCATAAAGAACGAACCGCAACGG 17170 36 100.0 ACCGCAACGG .................................... AGGGAA ========== ====== ====== ====== ========== ==================================== 10 36 30 GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT Array 6 >MGYG000153268_1 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ===================================== ====== 131525 37 97.3 26 CAAAATAAGG .................A................... ATCCCCCTTTCACATGATACACTTGT 131588 37 100.0 27 ATACACTTGT ..................................... CACTGAACATTCGCTTTTCTGCCATTT 131652 37 100.0 TCTGCCATTT ..................................... AAAGAGAGGTATTTATTATGGCTGA ========== ====== ====== ====== ========== ===================================== 3 37 26 GGTTAAATAATAAGAAAGAATTTCTACTAGTGTAGAT Array 7 >MGYG000248147_1 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ================================ ====== 96707 32 96.9 35 TTGATGATCT .......................A........ CGGTTCTGTCTTGACCATTATGTTATAATCTAACC 96774 32 100.0 35 TAATCTAACC ................................ CATAAGTTATACCTCCCGATTATGCTACAGCCGGA 96841 32 100.0 35 TACAGCCGGA ................................ GTATTATTACAAACCCACCTTATAAATATGCTTAT 96908 32 100.0 ATATGCTTAT ................................ TGCAAAATAT ========== ====== ====== ====== ========== ================================ 4 32 35 CTGGCAACCCACTTGTCTACGAGGATTGCAAC Array 8 >MGYG000248147_2 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== =================================== ====== 103336 35 91.4 31 GCAGGTGCTT ---................................ AATGAATTGGTGTGGAGCTTACTATTTACAA 103402 35 97.1 33 CTATTTACAA ...........................G....... AGAATGATTAAATCAAGACACACAGCAATTTCG 103470 35 97.1 AGCAATTTCG ..................................T GCGAAAAAA ========== ====== ====== ====== ========== =================================== 3 35 32 AAATTTTCGTCCCCGCTTGGGGATGGGTTGGTTCC Array 9 >MGYG000279548_5 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ==================================== ====== 119282 36 100.0 30 TGAATTTGAG .................................... TTTGTCAGGTGGCTTTTTGGCATAATGTCG 119348 36 100.0 30 CATAATGTCG .................................... TCTATTATGCGTAGTTTCCCATCTTTTAAT 119414 36 100.0 30 ATCTTTTAAT .................................... TGGAGCTCATCCGAAATCATGTTCCAAAAC 119480 36 100.0 31 GTTCCAAAAC .................................... AGAAGTAAATGGAAATAGTGAACAGATTAAT 119547 36 100.0 30 ACAGATTAAT .................................... ATTATCTTCACCATTTACAATCAAGTTGTT 119613 36 100.0 30 TCAAGTTGTT .................................... AGAAATGTCACTATTGAAAGCTGTACATTC 119679 36 100.0 30 CTGTACATTC .................................... AATAATTCAGAGGGAAGAAACATTACTATT 119745 36 100.0 30 CATTACTATT .................................... AATAATTCAGAGGGAAGAAACATTACTATT 119811 36 100.0 30 CATTACTATT .................................... AATAATTCAGAGGGAAGAAACATTACTATT 119877 36 100.0 30 CATTACTATT .................................... GCTAAAACAGTAACAGATACACTTATGGTC 119943 36 100.0 30 ACTTATGGTC .................................... CTATCCATACAGAGAGACAAGCAATGGCTC 120009 36 100.0 30 GCAATGGCTC .................................... AGAATAAACAATGATTGACAACAAAACAAT 120075 36 100.0 30 ACAAAACAAT .................................... CGCAGACAGCGGGCTGACCACCGGAAATCT 120141 36 100.0 CCGGAAATCT .................................... TTCTGGCATA ========== ====== ====== ====== ========== ==================================== 14 36 30 GTTTGAGAATGATGTAAAAGTAAATGGTACTCAAAC Array 10 >MGYG000032586_158 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ================================= ====== 56 33 100.0 34 GCCCGTGTGT ................................. GCACGGAACAAATGGTTCAATTGCCGCATATCTT 123 33 100.0 34 CGCATATCTT ................................. CATGTGATGTTCTTGCCACATACTGGGAGACACT 190 33 100.0 36 GGGAGACACT ................................. CGCACGCTCTATCGATATCTGATGCTATCATATATC 259 33 100.0 35 ATCATATATC ................................. GATATGCTGACGGAGTATTCCAGTCTTTACCAGAC 327 33 100.0 35 TTTACCAGAC ................................. GTCAGCAAAGTTACGATTATGAAAAGACAATTTTT 395 33 100.0 35 GACAATTTTT ................................. GACTTGTTGGCTACGTCAGTCGAATCTCTTGCAAT 463 33 100.0 34 CTCTTGCAAT ................................. TCAAGCAGTTCGCGGGCGACAACTCGAGCAATAA 530 33 100.0 33 CGAGCAATAA ................................. ACTCCAAATGGTGGATAATATAGGTAATAAGTA 596 33 100.0 35 GTAATAAGTA ................................. CTGGGCTGTCAGAGGTGACAATAGGCGGTTGTGGG 664 33 100.0 34 CGGTTGTGGG ................................. CTAAATCCTCATTGTCAGAATCAACCACATGGGC 731 33 100.0 CCACATGGGC ................................. TGCGCAAAGT ========== ====== ====== ====== ========== ================================= 11 33 34 ATTTCAATCCACGCTCCCCGCACGGGGAGCGAC Array 11 >MGYG000288428_19 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ================================ ====== 36680 32 100.0 34 CATTTTTGCC ................................ CATTAATCTGGACTGTAGACTTTAAAATATCACC 36746 32 100.0 34 AAATATCACC ................................ AACATGGCGCAGAACACTTGCGCATTACAGAACA 36812 32 100.0 33 TTACAGAACA ................................ ATATAGTTCAGCAGGAACATCCGCACCAGAATA 36877 32 100.0 34 CACCAGAATA ................................ GATACGAGCAGGAACCGCAGATACCACAATAAAA 36943 32 100.0 34 CACAATAAAA ................................ ACAGATGCAGAAACTTAGTGTTGAAGTCCTGGAG 37009 32 100.0 34 AGTCCTGGAG ................................ TCTTGAAGCGGCAGTGAGATGTTGCATCGTCACA 37075 32 100.0 34 CATCGTCACA ................................ ATGAAGCAAAGAGTATCAGCTTACGAGACAGCTG 37141 32 100.0 35 GAGACAGCTG ................................ ACGACATAGCCTACACAAAGGCAAATGCCTACGAT 37208 32 100.0 34 TGCCTACGAT ................................ CGTAATCTCAACTATATCGCGACTGGAAATCATT 37274 32 100.0 GGAAATCATT ................................ AACTGATATG ========== ====== ====== ====== ========== ================================ 10 32 34 GTCGCTCCTCTTGTAGGAGCGTGGATTGAAAT Array 12 >MGYG000288428_52 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ==================================== ====== 20576 36 100.0 30 CGCAATCGCA .................................... GGTTGTGATAATATCACATTATATGTAACT 20642 36 100.0 29 ATATGTAACT .................................... CTTATGAATAGTTTAGTTAAACAGGCAAC 20707 36 100.0 30 AACAGGCAAC .................................... AGATTAATTACATTTGCAAGCGGTGAACAA 20773 36 100.0 30 CGGTGAACAA .................................... TTTCAATATCATTCATTGTTTTTTCTAGTT 20839 36 100.0 30 TTTTCTAGTT .................................... ACGGAATACAATAATTTTTCGATTTGCTAT 20905 36 100.0 30 GATTTGCTAT .................................... TCAACTGTTCTTTGATGAAATGGTCGAGAG 20971 36 100.0 30 TGGTCGAGAG .................................... TTCTCCTTTTTCTTTAAATTTTTTATTTAA 21037 36 100.0 30 TTTTATTTAA .................................... GAAATTGTCATGCCTAAGTAAATAGGTGTA 21103 36 100.0 30 AATAGGTGTA .................................... TACCACCATCTACTTCCGTTATGTCCAAGT 21169 36 100.0 30 ATGTCCAAGT .................................... TACAGCGGTATGAAATGAACCTTTTGAGGA 21235 36 100.0 30 CTTTTGAGGA .................................... ACCTGTGTTATGTCTACTGTAACGCCATCA 21301 36 100.0 30 AACGCCATCA .................................... GATTTTTTTGTACCCAACTAACTTAGTCAT 21367 36 100.0 29 ACTTAGTCAT .................................... ATGTACGTTTACAGTTGTGTCTTGGTACT 21432 36 100.0 TCTTGGTACT .................................... AGGGAACGGAA ========== ====== ====== ====== ========== ==================================== 14 36 29 GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT Array 13 >MGYG000272681_3 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ================================ ====== 36105 32 100.0 35 TTTTAGGTAA ................................ CGGAGGATATCATTGGTCTGGTCTGCAATATGTGG 36172 32 100.0 33 CAATATGTGG ................................ AATATCAAAAATTATGTAGTAGAGATGATTACA 36237 32 100.0 33 GATGATTACA ................................ AAGGTTCTGTGTTCATTGGAAAACGCGGTCGTG 36302 32 100.0 34 CGCGGTCGTG ................................ CATATTCGCACAGTTGTAACTGCCCGGTATGCAA 36368 32 100.0 36 CGGTATGCAA ................................ ATGGAGGCTTTTTCAAAAAATTATTATGCTTTTTTC 36436 32 100.0 33 TGCTTTTTTC ................................ GATATGCAAACCATTGTTAACAATTTTGATAGA 36501 32 100.0 34 TTTTGATAGA ................................ TGTGTTATTCACAACAATCGTGAATATTGGTTAG 36567 32 100.0 33 TATTGGTTAG ................................ TACTTGAAAGCCAGATAGTTGCCATGCGTGGCA 36632 32 100.0 34 ATGCGTGGCA ................................ GGGATTATGCCGATTTCACGCACGCATTTTTACA 36698 32 100.0 33 CATTTTTACA ................................ AGTTATCAACATCCTTTTTTCTGACATCATAAA 36763 32 100.0 33 ACATCATAAA ................................ AATTTCGTTGTAATTCTTTAGCTTCTGTTTTGA 36828 32 100.0 35 TCTGTTTTGA ................................ GGAAAACCCGGGCAGAATCAGCAGAGAAAATGCTC 36895 32 100.0 32 GAAAATGCTC ................................ GACATTTTTACGGAATGAGCGAGCAGAATAAA 36959 32 100.0 35 GCAGAATAAA ................................ GCATGATGGCAGAAATAAAGGCAAAAAAAATAGAT 37026 32 100.0 34 AAAAATAGAT ................................ GGTTCAAACTGTGGTGCATTTTTACTGTAATTTT 37092 32 100.0 34 CTGTAATTTT ................................ CATCTGTGACCAGCATTGGAGCCACAATCGCAGA 37158 32 100.0 37 CAATCGCAGA ................................ CGTCAACCTCAAATGTAAGGATGATGCCTTGTCCATT 37227 32 100.0 35 CTTGTCCATT ................................ CAGAGGACACTTACCGTATAGTAAATGCAATTAAC 37294 32 100.0 35 TGCAATTAAC ................................ ATTGTCTTTTTTGCTTCTGTTTTGGAATCCTCTGT 37361 32 100.0 34 AATCCTCTGT ................................ AGTGAAGATCAGAAGCGCATGATCACAATTTACA 37427 32 100.0 35 ACAATTTACA ................................ AAAGGGCAGACTTCAATGTTTGCCCTTATATTTTT 37494 32 100.0 33 TTATATTTTT ................................ TCTGTAAAAGGGTATGCATTTTCAATGTCTCCA 37559 32 100.0 34 AATGTCTCCA ................................ AAGCAATCTGCTTGAAAATATTGCAAAGTTCCTT 37625 32 100.0 36 AAAGTTCCTT ................................ GAACAGTCAGAAAAAGAGTATACCAGCGAAGAAAAA 37693 32 100.0 35 CGAAGAAAAA ................................ TGAAATTGGGACTGGATTCAAAAAGCACGATTGAT 37760 32 100.0 33 CACGATTGAT ................................ AAAGCAAAAGGATTGACGCAAGTTGAGTTTGGT 37825 32 100.0 TGAGTTTGGT ................................ AGCAAAAATG ========== ====== ====== ====== ========== ================================ 27 32 34 CTTTCAATCCACGCTCCTACAAGAGGAGCGAC Array 14 >MGYG000272681_3 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ==================================== ====== 46488 36 100.0 29 TCCGTTCCCT .................................... TTCTGCGATTGCGTTAGTGTTCATGTGGT 46553 36 100.0 30 TTCATGTGGT .................................... CTATATGGATCAGAATTGCCCGGATGCACC 46619 36 100.0 30 CGGATGCACC .................................... CGATAGTGACGAGATAGTTTATGTACTCGT 46685 36 100.0 30 ATGTACTCGT .................................... AGAAGACTTAAAAGGCTGGAAGTGCTGGGG 46751 36 100.0 30 AGTGCTGGGG .................................... TTAGCAGACAAAACAGAATATCCAGACTTT 46817 36 100.0 30 TCCAGACTTT .................................... TCTTGAGGACGGATATTGCATCATGGCAAC 46883 36 100.0 29 TCATGGCAAC .................................... ATGTGTAACATGTCTGGTAGACCCGCCGA 46948 36 100.0 30 GACCCGCCGA .................................... GTAAATATAGTATAATATGAGTGTAGAAAA 47014 36 100.0 30 GTGTAGAAAA .................................... TGAAAATCCTACAAGTACGAAATCTATGTG 47080 36 94.4 AATCTATGTG .........................A........C. CCTGGTCT ========== ====== ====== ====== ========== ==================================== 10 36 29 ATTATAACATACCAAGTAATAACCGGGAACTACAGC Array 15 >MGYG000272681_85 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ============================== ====== 1736 30 100.0 34 GGGACGCATC .............................. TTTTTCCTTATCTCCTTTACACTGTGTTATTTTG 1800 30 100.0 35 TGTTATTTTG .............................. CCTGGCAACAGTAATTTTCGCCAATAACGGTAGAT 1865 30 100.0 33 AACGGTAGAT .............................. TATAAGGACAATGTAACAACCTTTGTGGAAAGC 1928 30 100.0 33 TGTGGAAAGC .............................. TTTAGGAGATGGAGTCTTTATTACTGGTGCTTC 1991 30 100.0 35 CTGGTGCTTC .............................. CGTTCTCTCCGCTTGCTTCTGGAAAACTGTTTTTC 2056 30 100.0 33 ACTGTTTTTC .............................. GGCGGCAAATTTACAGTATTTAGCCGCAAATAA 2119 30 100.0 33 CCGCAAATAA .............................. CTGTAAAGAAATTGATGACTATCTTGCCTACGC 2182 30 100.0 34 TTGCCTACGC .............................. TATCTGCCGCCGCTGTTCCAAGAATTTCCTCGGT 2246 30 100.0 38 TTTCCTCGGT .............................. GATTAAATCATGGCAAAAGAATTTGTTTACAGCAAGAC 2314 30 100.0 34 ACAGCAAGAC .............................. CAAATTCCTGAAAGAATCCAAGCCATTTCTGTTT 2378 30 100.0 33 ATTTCTGTTT .............................. ATACATCTAAGGAGTTTTGCAAGAAAGTGTAGG 2441 30 100.0 34 AAAGTGTAGG .............................. CAGAACAGCACAGAATCCGGAATGCATGGAGAAG 2505 30 100.0 33 CATGGAGAAG .............................. GCTTCTATCTACCATCTTTTCCTCCACTCTATG 2568 30 100.0 34 CCACTCTATG .............................. ATTCAACACCTCACGTTTTGTTGAAAACATCTCT 2632 30 100.0 34 AAACATCTCT .............................. GCAGACCAATGGCAGCACGGATGTGACAATCGAG 2696 30 100.0 33 GACAATCGAG .............................. AGAAGTACAAAAAGGAATCGTACAGACGCAGGC 2759 30 96.7 33 AGACGCAGGC .......................A...... TTACTTTCAGCGGATCGTCCAGCCCCCGGAAGT 2822 30 100.0 33 CCCCGGAAGT .............................. TAAGATCACAGAATATCCGGAGCATCCGGAGAA 2885 30 100.0 32 ATCCGGAGAA .............................. GTGAAAAAGGCAAGTAAAATTCTGAGCCTGGT 2947 30 100.0 33 TGAGCCTGGT .............................. CTGAGTGGGGCGTGAGCAAGATATTTGCCATTA 3010 30 100.0 32 TTTGCCATTA .............................. CTGGCCGGGAACAGTTCTGACGATTCCAGGAT 3072 30 100.0 35 ATTCCAGGAT .............................. TTGTAGGCGGTTTTGAAAGCTATCTGAGCAGAAAT 3137 30 100.0 33 GAGCAGAAAT .............................. TGAAAAAGACTTTCTCGCAGCCAAAATAACGTT 3200 30 100.0 34 AAATAACGTT .............................. CCAGGAATGCGGATGCACGATAACCGATCAGTAC 3264 30 100.0 33 CGATCAGTAC .............................. GGAAAAACAGTATGCTCCTGAAGAAGCGTGGAT 3327 30 100.0 AAGCGTGGAT .............................. GGCAAATTTA ========== ====== ====== ====== ========== ============================== 26 30 33 ATTTCAACTCACGCCCTCACGGAGGGCGAC Array 16 >MGYG000272681_134 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ==================================== ====== 5803 36 100.0 30 AGTTATGTTA .................................... ATAAGCGGGGAAAAGCCTGAAAGCAAATTC 5869 36 100.0 30 AAGCAAATTC .................................... TGATTCCTACGTTTCAGTAGGGTTCAATGA 5935 36 100.0 30 GGTTCAATGA .................................... GCAAGATACAGCCAGCATCACAAACCGAAC 6001 36 100.0 29 CAAACCGAAC .................................... CGACCACAGTATACACATACTTTTTCTGT 6066 36 100.0 30 CTTTTTCTGT .................................... TGTCTGACGGTCAATAAAATATTCAGCTGC 6132 36 100.0 30 ATTCAGCTGC .................................... TGTTATACATTACCGTATCCTTTCCGCACA 6198 36 100.0 30 TTTCCGCACA .................................... TCACTGGATATTCCCGATGTACTTACTCCC 6264 36 100.0 30 ACTTACTCCC .................................... ACCCGTCATAGCAGAAAGTACAGACGCCCA 6330 36 100.0 29 CAGACGCCCA .................................... TAACTGACAAGTTCAAATCATGATCTTTA 6395 36 100.0 30 ATGATCTTTA .................................... CGATAACAATATCATTTGTGGATAGCCTTT 6461 36 100.0 30 GATAGCCTTT .................................... CGGTGGTCGGTGTTCTTGCCGCTTCTGTCG 6527 36 100.0 30 GCTTCTGTCG .................................... TCGAAGATCGTTTATCAGCCGCAGATCATT 6593 36 100.0 30 GCAGATCATT .................................... GCGTTCGGGAGACCCCTTTTCTTTCTCTGA 6659 36 100.0 30 CTTTCTCTGA .................................... TTCGCTTCCGTGGTCTTTACCTCGAAATAT 6725 36 100.0 29 CTCGAAATAT .................................... TAGTGTGCTTGACGAATTGATTGATGTGC 6790 36 100.0 30 ATTGATGTGC .................................... TGATTATTCCGTGTCCGGTGGTCGTGCGTT 6856 36 100.0 29 GTCGTGCGTT .................................... GACAAGTGCGCCCGCTAACAACCGCGCCT 6921 36 100.0 AACCGCGCCT .................................... TCGAAGATCG ========== ====== ====== ====== ========== ==================================== 18 36 29 GTTTGAATACCATATATCTTTACATCATTCTCAAAC Array 17 >MGYG000197636_2 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ================================= ====== 145662 33 93.9 33 TAGTATTTAA -...............T................ AGAAAACCGCATAAGGACCGATACCACATTACA 145728 33 100.0 34 CCACATTACA ................................. AACCCATTGTCGCTCTTGCGGTTCTAAACTTTCA 145795 33 100.0 35 TAAACTTTCA ................................. GGCTGAGGCGGAGAATGCCGCAAGCTGGGACTTTT 145863 33 100.0 TGGGACTTTT ................................. TGCAAAATAT ========== ====== ====== ====== ========== ================================= 4 33 34 GCTGGCAACCCACTTGCCTACGAGGATTGCAAC Array 18 >MGYG000232241_150 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ======================================== ====== 3832 40 92.5 34 CATATAGCAA ..A..................................CC. GAATTACATCGTATGCCAATACGCAGTTGCTTTT 3906 40 97.5 41 AGTTGCTTTT .....................................--- TGTACTACTATGCGGTATTCCATCTGAAGGATGGCGGCTAC 3987 40 92.5 TGGCGGCTAC GG............-......................--. ATCACATTCA ========== ====== ====== ====== ========== ======================================== 3 40 37 AAGTTTCCGTCCCCTTTCGGGGAATCATTTAGAAAAT--A Array 19 >MGYG000228320_130 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ==================================== ====== 2594 36 91.7 30 TTTAAATCCA .......A............T...........T... TTTGAGAGAAATACATGAAACGAATATCTG 2660 36 100.0 30 CGAATATCTG .................................... CAACAACACTAAAGGTAATGCGTGCCGACT 2726 36 100.0 30 CGTGCCGACT .................................... TCTCTCGCTATCATTATTGTGTAGGCTACC 2792 36 97.2 30 GTAGGCTACC .........C.......................... TAGGGAACCAAAAATATAGATATACGGGAA 2858 36 100.0 TATACGGGAA .................................... CTATCCAATT ========== ====== ====== ====== ========== ==================================== 5 36 30 GTTGGATGTACCTTTCTTTTATAGATGATTTACATC Array 20 >MGYG000233437_34 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ==================================== ====== 16822 36 100.0 30 ATACATTGTA .................................... CCGGCATATCCATAACCAAAATTGCTTTAG 16888 36 100.0 30 ATTGCTTTAG .................................... AGCCAAAGGCAAGTGCTGAACCTAAACGTG 16954 36 100.0 30 CCTAAACGTG .................................... CCATAGCACCTCACTTCTGTCCCCTGTTCT 17020 36 100.0 CCCCTGTTCT .................................... TTGTGTTCT ========== ====== ====== ====== ========== ==================================== 4 36 30 GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT Array 21 >MGYG000233437_42 Pos Repeat %id Spacer Left flank Repeat Spacer ========== ====== ====== ====== ========== ==================================== ====== 3 36 100.0 30 AT .................................... TTAAGTCTTTCAATGTCAAGAGAGCCGAAG 69 36 100.0 29 AGAGCCGAAG .................................... AAAAGGAAGTATGAGAATAGCAGTAAAAG 134 36 100.0 29 GCAGTAAAAG .................................... AAAAAACATTTATAGTTATTCAAAAACAG 199 36 100.0 30 TCAAAAACAG .................................... AGATCCTGGGCAATCAGATCCTCAAAATAC 265 36 100.0 30 CTCAAAATAC .................................... TTTAAGCTTTTGATGATTAGATCTGCAAGT 331 36 100.0 30 ATCTGCAAGT .................................... ATAAAATCCCTGATATGAAAGTCCGACGTT 397 36 100.0 GTCCGACGTT .................................... AGGGAACGGT ========== ====== ====== ====== ========== ==================================== 7 36 29 GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT SUMMARY BY SIMILARITY Array Sequence Position Length # Copies Repeat Spacer + Consensus ===== ================ ========== ========== ======== ====== ====== = ========= 4 MGYG000273829_14 15191 2015 22 36 58 + GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT 5 MGYG000273829_14 16576 630 10 36 30 + GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT 12 MGYG000288428_52 20576 892 14 36 29 + GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT 14 MGYG000272681_3 46488 628 10 36 29 - GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT 20 MGYG000233437_34 16822 234 4 36 30 + GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT 21 MGYG000233437_42 3 430 7 36 29 + GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT ************************************ 10 MGYG000032586_15 56 708 11 33 34 + ATTTCAATCCACGCTCCCCGCACGGGGAGCGAC 11 MGYG000288428_19 36680 626 10 32 34 - ATTTCAATCCACGCT-CCTACAAGAGGAGCGAC 13 MGYG000272681_3 36105 1752 27 32 34 + CTTTCAATCCACGCT-CCTACAAGAGGAGCGAC ************** ** ** * ******** 1 MGYG000166779_43 4 1410 22 36 29 + GTTGTGGTTTGATGTAGGAATCAAAAGATATACAAC 9 MGYG000279548_5 119282 895 14 36 30 + GTTTGAGAATGATGTAAAAGTAAATGGTACTCAAAC 16 MGYG000272681_13 5803 1154 18 36 29 - GTTTGAGAATGATGTAAAGATATATGGTATTCAAAC *** * ******* * * * * *** 2 MGYG000242676_4 60549 415 7 36 27 + --TTTAATAACCCTATATAATTTCTACTATTGTAGATA 6 MGYG000153268_1 131525 164 3 37 26 + GGTTAAATAATAAGAAAGAATTTCTACTAGTGTAGAT- ** ***** * * *********** ******* 3 MGYG000242676_4 157550 366 6 36 30 + -----GTTTTACTACCTTATA-----GATTTACACTATTCTCAAAC 19 MGYG000228320_13 2594 300 5 36 30 + GTTGGATGTACCTTTCTTTTATAGATGATTTACATC---------- * * ** *** ** ******** 7 MGYG000248147_1 96707 233 4 32 35 + -CTGGCAACCCACTTGTCTACGAGGATTGCAAC 17 MGYG000197636_2 145662 233 4 33 34 + GCTGGCAACCCACTTGCCTACGAGGATTGCAAC *************** **************** 8 MGYG000248147_2 103336 166 3 35 32 + AAATTTTCGTCCCCGCTTGGGGATGGGTTGGTTCC 15 MGYG000272681_85 1736 1621 26 30 33 + ATTTCAACTCACGCCCTCACGGAGGGCGAC 18 MGYG000232241_15 3832 189 3 40 37 + AAGTTTCCGTCCCCTTTCGGGGAATCATTTAGAAAATA SUMMARY BY POSITION >MGYG000166779_43 Array Sequence Position Length # Copies Repeat Spacer Distance Consensus ===== ================ ========== ========== ======== ====== ====== ========== ========= 1 MGYG000166779_43 4 1410 22 36 29 GTTGTGGTTTGATGTAGGAATCAAAAGATATACAAC >MGYG000242676_4 Array Sequence Position Length # Copies Repeat Spacer Distance Consensus ===== ================ ========== ========== ======== ====== ====== ========== ========= 2 MGYG000242676_4 60549 415 7 36 27 TTTAATAACCCTATATAATTTCTACTATTGTAGATA 3 MGYG000242676_4 157550 366 6 36 30 96559 GTTTTACTACCTTATAGATTTACACTATTCTCAAAC >MGYG000273829_14 Array Sequence Position Length # Copies Repeat Spacer Distance Consensus ===== ================ ========== ========== ======== ====== ====== ========== ========= 4 MGYG000273829_14 15191 2015 22 36 58 GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT 5 MGYG000273829_14 16576 630 10 36 30 -688 GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT >MGYG000153268_1 Array Sequence Position Length # Copies Repeat Spacer Distance Consensus ===== ================ ========== ========== ======== ====== ====== ========== ========= 6 MGYG000153268_1 131525 164 3 37 26 GGTTAAATAATAAGAAAGAATTTCTACTAGTGTAGAT >MGYG000248147_1 Array Sequence Position Length # Copies Repeat Spacer Distance Consensus ===== ================ ========== ========== ======== ====== ====== ========== ========= 7 MGYG000248147_1 96707 233 4 32 35 CTGGCAACCCACTTGTCTACGAGGATTGCAAC >MGYG000248147_2 Array Sequence Position Length # Copies Repeat Spacer Distance Consensus ===== ================ ========== ========== ======== ====== ====== ========== ========= 8 MGYG000248147_2 103336 166 3 35 32 AAATTTTCGTCCCCGCTTGGGGATGGGTTGGTTCC >MGYG000279548_5 Array Sequence Position Length # Copies Repeat Spacer Distance Consensus ===== ================ ========== ========== ======== ====== ====== ========== ========= 9 MGYG000279548_5 119282 895 14 36 30 GTTTGAGAATGATGTAAAAGTAAATGGTACTCAAAC >MGYG000032586_158 Array Sequence Position Length # Copies Repeat Spacer Distance Consensus ===== ================ ========== ========== ======== ====== ====== ========== ========= 10 MGYG000032586_15 56 708 11 33 34 ATTTCAATCCACGCTCCCCGCACGGGGAGCGAC >MGYG000288428_19 Array Sequence Position Length # Copies Repeat Spacer Distance Consensus ===== ================ ========== ========== ======== ====== ====== ========== ========= 11 MGYG000288428_19 36680 626 10 32 34 GTCGCTCCTCTTGTAGGAGCGTGGATTGAAAT >MGYG000288428_52 Array Sequence Position Length # Copies Repeat Spacer Distance Consensus ===== ================ ========== ========== ======== ====== ====== ========== ========= 12 MGYG000288428_52 20576 892 14 36 29 GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT >MGYG000272681_3 Array Sequence Position Length # Copies Repeat Spacer Distance Consensus ===== ================ ========== ========== ======== ====== ====== ========== ========= 13 MGYG000272681_3 36105 1752 27 32 34 CTTTCAATCCACGCTCCTACAAGAGGAGCGAC 14 MGYG000272681_3 46488 628 10 36 29 8597 ATTATAACATACCAAGTAATAACCGGGAACTACAGC >MGYG000272681_85 Array Sequence Position Length # Copies Repeat Spacer Distance Consensus ===== ================ ========== ========== ======== ====== ====== ========== ========= 15 MGYG000272681_85 1736 1621 26 30 33 ATTTCAACTCACGCCCTCACGGAGGGCGAC >MGYG000272681_134 Array Sequence Position Length # Copies Repeat Spacer Distance Consensus ===== ================ ========== ========== ======== ====== ====== ========== ========= 16 MGYG000272681_13 5803 1154 18 36 29 GTTTGAATACCATATATCTTTACATCATTCTCAAAC >MGYG000197636_2 Array Sequence Position Length # Copies Repeat Spacer Distance Consensus ===== ================ ========== ========== ======== ====== ====== ========== ========= 17 MGYG000197636_2 145662 233 4 33 34 GCTGGCAACCCACTTGCCTACGAGGATTGCAAC >MGYG000232241_150 Array Sequence Position Length # Copies Repeat Spacer Distance Consensus ===== ================ ========== ========== ======== ====== ====== ========== ========= 18 MGYG000232241_15 3832 189 3 40 37 AAGTTTCCGTCCCCTTTCGGGGAATCATTTAGAAAATA >MGYG000228320_130 Array Sequence Position Length # Copies Repeat Spacer Distance Consensus ===== ================ ========== ========== ======== ====== ====== ========== ========= 19 MGYG000228320_13 2594 300 5 36 30 GTTGGATGTACCTTTCTTTTATAGATGATTTACATC >MGYG000233437_34 Array Sequence Position Length # Copies Repeat Spacer Distance Consensus ===== ================ ========== ========== ======== ====== ====== ========== ========= 20 MGYG000233437_34 16822 234 4 36 30 GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT >MGYG000233437_42 Array Sequence Position Length # Copies Repeat Spacer Distance Consensus ===== ================ ========== ========== ======== ====== ====== ========== ========= 21 MGYG000233437_42 3 430 7 36 29 GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT