use anyhow::Result; use righor::{shared::DnaLike, AminoAcid}; #[test] fn amino_acids_test() -> Result<()> { // Basic test, ne inference with a real model and a real sequence // Just check that nothing panic or return an error. // Note: this rely on the presence of data files, so it may // fail if the data files are not present let amino_acid_str = "CAFREW"; let amino_acid = AminoAcid::from_string(amino_acid_str)?; let seq = DnaLike::from_amino_acid(amino_acid.clone()); assert!(seq.translate()? == amino_acid.clone()); assert!(seq.extract_subsequence(3, 6).translate()? == AminoAcid::from_string("A")?); assert!(seq.extract_subsequence(3, 9).translate()? == AminoAcid::from_string("AF")?); assert!(seq.extract_subsequence(3, 18).translate()? == AminoAcid::from_string("AFREW")?); Ok(()) }