use anyhow::Result; pub mod common; // #[test] // fn test_generation_real() -> Result<()> { // // Basic test, ne inference with a real model and a real sequence // // Just check that nothing panic or return an error. // // Note: this rely on the presence of data files, so it may // // fail if the data files are not present // let model = righor::vdj::Model::load_from_files( // Path::new("models/human_T_beta/model_params.txt"), // Path::new("models/human_T_beta/model_marginals.txt"), // Path::new("models/human_T_beta/V_gene_CDR3_anchors.csv"), // Path::new("models/human_T_beta/J_gene_CDR3_anchors.csv"), // )?; // let mut gen = righor::vdj::Generator::new(model, Some(0), None, None)?; // for _ in 0..100 { // println!("{}", gen.generate(true).full_seq); // } // Ok(()) // } #[test] fn test_generation_simple_model() -> Result<()> { // Basic test, ne inference with a real model and a real sequence // Just check that nothing panic or return an error. // Note: this rely on the presence of data files, so it may // fail if the data files are not present let model = common::simple_model_vdj(); let mut gen = righor::vdj::Generator::new(model, Some(0), None, None)?; for _ in 0..100 { println!("{}", gen.generate(false)?.full_seq); } Ok(()) }