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- [Usage](#usage)
  - [Available options and subcommands](#available-options-and-subcommands)
- [Install](#install)
  - [conda](#conda)
  - [cargo](#cargo)
  - [Pre-complied binaries](#pre-complied-binaries)
  - [From source](#from-source)
- [Examples](#examples)
  - [Manipulating PAFs and creating liftovers](#manipulating-pafs-and-creating-liftovers)
  - [Splitting up a fastx file](#splitting-up-a-fastx-file)
  - [Extract fasta from a genome with a bed file](#extract-fasta-from-a-genome-with-a-bed-file)
- [TODO](#todo)

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