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# See Cargo.toml.orig for the original contents.

[package]
edition = "2021"
name = "rustynetics"
version = "0.1.3"
authors = ["Philipp Benner"]
build = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "A high-performance genomics libary specialized in handling BAM and BigWig files"
documentation = "https://docs.rs/rustynetics"
readme = "README.md"
keywords = [
    "rust",
    "genomics",
    "bioinformatics",
]
categories = [
    "command-line-utilities",
    "science",
    "data-structures",
]
license = "MIT"
repository = "https://github.com/pbenner/rustynetics"

[lib]
name = "rustynetics"
path = "src/lib.rs"

[[bin]]
name = "bam-check-bin"
path = "src/bin/bam-check-bin.rs"

[[bin]]
name = "bam-genome"
path = "src/bin/bam-genome.rs"

[[bin]]
name = "bam-to-bigwig"
path = "src/bin/bam-to-bigwig.rs"

[[bin]]
name = "bam-view"
path = "src/bin/bam-view.rs"

[[bin]]
name = "bigwig-genome"
path = "src/bin/bigwig-genome.rs"

[[bin]]
name = "bigwig-info"
path = "src/bin/bigwig-info.rs"

[[bin]]
name = "bigwig-query"
path = "src/bin/bigwig-query.rs"

[[bin]]
name = "bigwig-query-sequence"
path = "src/bin/bigwig-query-sequence.rs"

[[test]]
name = "test_bigwig"
path = "tests/test_bigwig.rs"

[[test]]
name = "test_genome"
path = "tests/test_genome.rs"

[[test]]
name = "test_granges"
path = "tests/test_granges.rs"

[[test]]
name = "test_meta"
path = "tests/test_meta.rs"

[dependencies.approx]
version = "0.5.1"

[dependencies.async-stream]
version = "0.3.5"

[dependencies.byteorder]
version = "1.5.0"

[dependencies.clap]
version = "4.3"
features = ["derive"]

[dependencies.flate2]
version = "1.0"

[dependencies.futures]
version = "0.3.31"

[dependencies.futures-core]
version = "0.3.30"

[dependencies.futures-util]
version = "0.3.30"

[dependencies.list_comprehension_macro]
version = "0.1"

[dependencies.mysql]
version = "25.0.1"

[dependencies.num]
version = "0.4"

[dependencies.plotters]
version = "0.3.7"

[dependencies.rand]
version = "0.8.5"

[dependencies.regex]
version = "1.10"

[dependencies.reqwest]
version = "0.12.8"
features = ["blocking"]

[dependencies.serde]
version = "1.0"
features = ["derive"]

[dependencies.serde_json]
version = "1.0"