# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
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# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
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# See Cargo.toml.orig for the original contents.

[package]
edition = "2021"
name = "seq_geom_xform"
version = "0.4.0"
authors = ["Rob Patro <rob@cs.umd.edu>"]
include = [
    "/src/*.rs",
    "/src/lib/*.rs",
    "/src/bin/*.rs",
    "/Cargo.toml",
    "/Cargo.lock",
    "/README.md",
    "/LICENSE",
    "/CONTRIBUTING.md",
    "/CODE_OF_CONDUCT.md",
]
description = "Transform/normalize complex single-cell fragment geometries into simple geometries."
homepage = "https://github.com/COMBINE-lab/seq_geom_xform"
readme = "README.md"
keywords = [
    "single-cell",
    "preprocessing",
    "RNA-seq",
]
categories = [
    "command-line-utilities",
    "science",
]
license-file = "LICENSE"
repository = "https://github.com/COMBINE-lab/seq_geom_xform"

[lib]
name = "seq_geom_xform"
path = "src/lib.rs"

[[bin]]
name = "seq_xformer"
path = "src/bin/bin.rs"

[dependencies.anyhow]
version = "1.0"

[dependencies.clap]
version = "4.2.1"
features = ["derive"]

[dependencies.needletail]
version = "0.5.1"

[dependencies.nix]
version = "0.26.2"
features = ["fs"]

[dependencies.regex]
version = "1.7"

[dependencies.seq_geom_parser]
version = "0.3.0"

[dependencies.tempfile]
version = "3.5.0"

[dependencies.thousands]
version = "0.2.0"

[dependencies.tracing]
version = "0.1.37"

[dependencies.tracing-subscriber]
version = "0.3.16"
features = ["env-filter"]
default-features = true