[package]
name = "seq_io"
version = "0.3.2"
# note: dev-depencies require at least v1.63, but seq_io alone works with 1.56.1
rust-version = "1.56.1"
edition = "2021"
authors = ["<markschl19@gmail.com>"]
description = "Fast FASTA and FASTQ readers"
license = "MIT"
repository = "https://github.com/markschl/seq_io"
documentation = "https://docs.rs/seq_io"
readme = "README.md"
keywords = ["bio", "fasta", "fastq", "parser"]
exclude = [
    "bench_results/*",
]

[dependencies]
memchr = "2.5.0"
buffer-redux = { version = "1.0.0", default_features = false }
scoped_threadpool = "0.1"
crossbeam-utils = "0.8"
serde = "1.0"
serde_derive = "1.0"

[dev-dependencies]
bio = { version = "1.3", default_features = false }
fastq = "0.6"
matches = "0.1.10"
lazy_static = "1.4"
rand = "0.8"
rand_distr = "0.4"
rand_isaac = "0.3"
criterion = { version = "0.5", default_features = false, features = ["csv_output"] }

[profile.bench]
lto = true

[[bench]]
name = "fasta"
harness = false

[[bench]]
name = "fastq"
harness = false