import os from ggshu import aes, geom_arrow, geom_kde, ggmap, geom_metabolite def test_writing_does_not_raise(df_cond): file_name = "some_tmp_data" ( ggmap( df_cond, aes(reaction="r", color="flux", size="flux", y="kcat", condition="cond"), ) + geom_arrow() + geom_metabolite(aes=aes(color="conc", metabolite="m")) + geom_kde(aes=aes(y="km"), mets=True) ).to_json(file_name) assert os.path.exists(file_name + ".metabolism.json") os.remove(file_name + ".metabolism.json") def test_writing_tmp(df_cond): file_name = "some_tmp_data" df_reac = df_cond[["r", "flux", "kcat", "cond"]] df_reac = df_reac[~df_reac.r.isna()] df_met = df_cond[["m", "conc", "km", "cond"]] df_met = df_met[~df_met.m.isna()] (( ggmap( df_reac, aes(reaction="r", color="flux", size="flux", y="kcat", condition="cond"), ) + geom_arrow() ) / ( ggmap( df_met, aes(color="conc", metabolite="m", condition="cond"), ) + geom_metabolite() + geom_kde(aes=aes(y="km"), mets=True) )).to_json(file_name) assert os.path.exists(file_name + ".metabolism.json") os.remove(file_name + ".metabolism.json")