/* nbrhoodg.c  version 1.1; B D McKay, Apr 2018. */

#define USAGE "nbrhoodg [-lq] [-c|-C] [-d#|d#:#] [-v#|-v#:#] [infile [outfile]]"

#define HELPTEXT \
" Extract neighbours of vertices of a graph.\n\
\n\
    The output file has a header if and only if the input file does.\n\
    No isomorph reduction is done.\n\
\n\
    -l  Canonically label outputs (default is same labelling as input)\n\
    -C  Extract closed neighbourhoods instead.\n\
    -c  Extract non-neighbourhoods instead.\n\
    -d# -d#:# Only include vertices with original degree in the given range\n\
    -v# -v#:# Only include vertices with these vertex numbers (first is 0).\n\
        No empty graphs are output.\n\
	For digraphs, out-degree and out-neighbourhoods are used.\n\
    -q  Suppress auxiliary information\n"

/*************************************************************************/

#include "gtools.h" 

static FILE *outfile;
static nauty_counter nout;
static int outcode;
static boolean digraph,dolabel;

/**************************************************************************/

static void
getsubgraph(graph *gin, int *perm, int nperm, graph *gout, int m, int n)
/* Makes a subgraph gin<perm[0..nperm-1]> */
{
    long li;
    int i,j,k;
    int newm;
    set *gi,*wgi;

    newm = SETWORDSNEEDED(nperm);

    for (li = (long)newm * (long)nperm; --li >= 0;) gout[li] = 0;

    for (i = 0, gi = (set*)gout; i < nperm; ++i, gi += newm)
    {
        wgi = GRAPHROW(gin,perm[i],m);
        for (j = 0; j < nperm; ++j)
        {
            k = perm[j];
            if (ISELEMENT(wgi,k)) ADDELEMENT(gi,j);
        }
    }
}

/**************************************************************************/

int
main(int argc, char *argv[])
{
    char *infilename,*outfilename;
    FILE *infile;
    boolean badargs,quiet,dswitch,vswitch,cswitch,Cswitch;
    int i,j,m,n,v,argnum;
    int codetype;
    graph *g,*gq;
    nauty_counter nin;
    char *arg,sw;
    setword *gv,*gi;
    long mindeg,maxdeg;
    long minvert,maxvert;
    int degv,msub,nsub;
    double t;
#if MAXN
    boolean degok[MAXN];
    boolean del[MAXN];
#else
    DYNALLSTAT(boolean,perm,perm_sz);
    DYNALLSTAT(graph,gsub,gsub_sz);
    DYNALLSTAT(graph,gx,gx_sz);
#endif

    HELP; PUTVERSION;

    infilename = outfilename = NULL;
    badargs = FALSE;
    Cswitch = cswitch = vswitch = dswitch = quiet = FALSE;

    argnum = 0;
    badargs = FALSE;
    for (j = 1; !badargs && j < argc; ++j)
    {
        arg = argv[j];
        if (arg[0] == '-' && arg[1] != '\0')
        {
    	    ++arg;
    	    while (*arg != '\0')
    	    {
    	        sw = *arg++;
    	             SWBOOLEAN('l',dolabel)
    	        else SWBOOLEAN('q',quiet)
    	        else SWBOOLEAN('c',cswitch)
    	        else SWBOOLEAN('C',Cswitch)
                else SWRANGE('v',":-",vswitch,minvert,maxvert,">E nbrhoodg -v")
                else SWRANGE('d',":-",dswitch,mindeg,maxdeg,">E nbrhoodg -d")
    	        else badargs = TRUE;
    	    }
        }
        else
        {
    	    ++argnum;
    	    if      (argnum == 1) infilename = arg;
            else if (argnum == 2) outfilename = arg;
    	    else                  badargs = TRUE;
        }
    }

    if (cswitch && Cswitch) gt_abort(">E nbrhoodg: -c and -C are incompatible\n");
	
    if (badargs)
    {
        fprintf(stderr,">E Usage: %s\n",USAGE);
        GETHELP;
        exit(1);
    }

    if (!quiet)
    {
        fprintf(stderr,">A nbrhoodg");
        if (dolabel) fprintf(stderr," -l");
        if (dswitch) fprintf(stderr," -d%ld:%ld",mindeg,maxdeg);
        if (vswitch) fprintf(stderr," -v%ld:%ld",minvert,maxvert);
        if (argnum > 0) fprintf(stderr," %s",infilename);
        if (argnum > 1) fprintf(stderr," %s",outfilename);
        fprintf(stderr,"\n");
        fflush(stderr);
    }

    if (!dswitch)
    {
	mindeg = 0;
	maxdeg = NAUTY_INFINITY;
    }
    if (!vswitch)
    {
	minvert = 0;
	maxvert = NAUTY_INFINITY;
    }
    if (mindeg < 0) mindeg = 0;
    if (maxdeg == NOLIMIT) maxdeg = NAUTY_INFINITY;
    if (minvert < 0) minvert = 0;
    if (maxvert == NOLIMIT) maxvert = NAUTY_INFINITY;

    if (dolabel) nauty_check(WORDSIZE,1,1,NAUTYVERSIONID);

    nin = nout = 0;
    if (infilename && infilename[0] == '-') infilename = NULL;
    infile = opengraphfile(infilename,&codetype,FALSE,1);
    if (!infile) exit(1);
    if (!infilename) infilename = "stdin";

    if (!outfilename || outfilename[0] == '-')
    {
        outfilename = "stdout";
        outfile = stdout;
    }
    else if ((outfile = fopen(outfilename,"w")) == NULL)
    {
        fprintf(stderr,"Can't open output file %s\n",outfilename);
        gt_abort(NULL);
    }

    if (codetype&SPARSE6)       outcode = SPARSE6;
    else if (codetype&DIGRAPH6) outcode = DIGRAPH6;
    else                        outcode = GRAPH6;

    if (codetype&HAS_HEADER)
    {
        if (outcode == SPARSE6)       writeline(outfile,SPARSE6_HEADER);
        else if (outcode == DIGRAPH6) writeline(outfile,DIGRAPH6_HEADER);
        else    	              writeline(outfile,GRAPH6_HEADER);
    }

    t = CPUTIME;
    while (TRUE)
    {
        if ((g = readgg(infile,NULL,0,&m,&n,&digraph)) == NULL) break;
        ++nin;

#if !MAXN
	DYNALLOC2(graph,gsub,gsub_sz,m,n,"nbrhoodg");
	if (dolabel) DYNALLOC2(graph,gx,gx_sz,m,n,"nbrhoodg");
        DYNALLOC1(int,perm,perm_sz,n,"nbrhoodg");
#endif

        for (v = minvert, gv = GRAPHROW(g,minvert,m);
                              v < n && v <= maxvert; ++v, gv += m)
        {
    	    degv = 0;
    	    for (i = 0; i < m; ++i) degv += POPCOUNT(gv[i]);
    	    if (degv < mindeg || degv > maxdeg) continue;

	    if (Cswitch)
	    {
		perm[0] = v;
		nsub = 1;
		for (i = 0; i < n; ++i)
		    if (ISELEMENT(gv,i) && i != v) perm[nsub++] = i;
	    }
	    else if (cswitch)
	    {
		nsub = 0;
		for (i = 0; i < n; ++i)
		    if (!ISELEMENT(gv,i) && i != v) perm[nsub++] = i;
	    }
	    else
	    {
		nsub = 0;
		for (i = 0; i < n; ++i)
		    if (ISELEMENT(gv,i) && i != v) perm[nsub++] = i;
	    }

	    if (nsub != 0)
	    {
		getsubgraph(g,perm,nsub,gsub,m,n);
		msub = SETWORDSNEEDED(nsub);
                if (dolabel)
                {
        	    fcanonise(gsub,msub,nsub,gx,NULL,digraph);
        	    gq = gx;
    	   	}
    	        else
                    gq = gsub;

                if (outcode == DIGRAPH6 || digraph) writed6(outfile,gq,msub,nsub);
                else if (outcode == SPARSE6)        writes6(outfile,gq,msub,nsub);
                else                                writeg6(outfile,gq,msub,nsub);
                ++nout;
	    }
        }

        FREES(g);
    }
    t = CPUTIME - t;

    if (!quiet)
        fprintf(stderr,
             ">Z  " COUNTER_FMT " graphs read from %s, "
                    COUNTER_FMT " written to %s; %3.2f sec.\n",
             nin,infilename,nout,outfilename,t);

    exit(0);
}