//------------------------------------------------------------------------------ // CHOLMOD/MATLAB/metis: MATLAB interface to CHOLMOD nested dissection via METIS //------------------------------------------------------------------------------ // CHOLMOD/MATLAB Module. Copyright (C) 2005-2023, Timothy A. Davis. // All Rights Reserved. // SPDX-License-Identifier: GPL-2.0+ //------------------------------------------------------------------------------ // Nested dissection using METIS_NodeND // // Usage: // // p = metis (A) orders A, using just tril(A) // p = metis (A,'sym') orders A, using just tril(A) // p = metis (A,'row') orders A*A' // p = metis (A,'col') orders A'*A // // METIS_NodeND's ordering is followed by CHOLMOD's etree or column etree // postordering. Requires METIS and the CHOLMOD Partition Module. #include "sputil2.h" void mexFunction ( int nargout, mxArray *pargout [ ], int nargin, const mxArray *pargin [ ] ) { #ifndef NPARTITION double dummy = 0 ; int64_t *Perm ; cholmod_sparse *A, Amatrix ; cholmod_common Common, *cm ; int64_t n, transpose, c, postorder ; char buf [LEN] ; //-------------------------------------------------------------------------- // start CHOLMOD and set defaults //-------------------------------------------------------------------------- cm = &Common ; cholmod_l_start (cm) ; sputil2_config (SPUMONI, cm) ; //-------------------------------------------------------------------------- // get inputs //-------------------------------------------------------------------------- if (nargout > 1 || nargin < 1 || nargin > 3) { mexErrMsgTxt ("Usage: p = metis (A, mode)") ; } //-------------------------------------------------------------------------- // get input matrix A //-------------------------------------------------------------------------- A = sputil2_get_sparse_pattern (pargin [0], CHOLMOD_DOUBLE, &Amatrix, cm) ; //-------------------------------------------------------------------------- // get A->stype, default is to use tril(A) //-------------------------------------------------------------------------- A->stype = -1 ; transpose = FALSE ; if (nargin > 1) { buf [0] = '\0' ; if (mxIsChar (pargin [1])) { mxGetString (pargin [1], buf, LEN) ; } c = buf [0] ; if (tolower (c) == 'r') { // unsymmetric case (A*A') if string starts with 'r' transpose = FALSE ; A->stype = 0 ; } else if (tolower (c) == 'c') { // unsymmetric case (A'*A) if string starts with 'c' transpose = TRUE ; A->stype = 0 ; } else if (tolower (c) == 's') { // symmetric case (A) if string starts with 's' transpose = FALSE ; A->stype = -1 ; } else { mexErrMsgTxt ("metis: p=metis(A,mode) ; unrecognized mode") ; } } if (A->stype && A->nrow != A->ncol) { mexErrMsgTxt ("metis: A must be square") ; } //-------------------------------------------------------------------------- // ordering A, AA', or A'A with METIS //-------------------------------------------------------------------------- postorder = (nargin < 3) ; int ok ; if (transpose) { // C = A', and then order C*C' with METIS cholmod_sparse *C = cholmod_l_transpose (A, 0, cm) ; n = C->nrow ; Perm = cholmod_l_malloc (n, sizeof (int64_t), cm) ; ok = cholmod_l_metis (C, NULL, 0, postorder, Perm, cm) ; cholmod_l_free_sparse (&C, cm) ; } else { // order A or A*A' with METIS n = A->nrow ; Perm = cholmod_l_malloc (n, sizeof (int64_t), cm) ; ok = cholmod_l_metis (A, NULL, 0, postorder, Perm, cm) ; } //-------------------------------------------------------------------------- // free workspace and return results //-------------------------------------------------------------------------- sputil2_free_sparse (&A, &Amatrix, 0, cm) ; if (!ok) mexErrMsgTxt ("metis failed") ; pargout [0] = sputil2_put_int (Perm, n, 1) ; cholmod_l_free (n, sizeof (int64_t), Perm, cm) ; cholmod_l_finish (cm) ; if (SPUMONI > 0) cholmod_l_print_common (" ", cm) ; #else mexErrMsgTxt ("METIS and the CHOLMOD Partition Module not installed\n") ; #endif }