# THIS FILE IS AUTOMATICALLY GENERATED BY CARGO
#
# When uploading crates to the registry Cargo will automatically
# "normalize" Cargo.toml files for maximal compatibility
# with all versions of Cargo and also rewrite `path` dependencies
# to registry (e.g., crates.io) dependencies.
#
# If you are reading this file be aware that the original Cargo.toml
# will likely look very different (and much more reasonable).
# See Cargo.toml.orig for the original contents.

[package]
edition = "2021"
name = "sumi"
version = "0.1.1"
exclude = ["docs/*"]
description = "A simple analysis for small RNA libraries with UMIs."
readme = "README.md"
keywords = [
    "sRNA",
    "srna",
    "miRNA",
    "mirna",
    "qiagen",
]
license = "MIT"
repository = "https://github.com/cookienocreams/sumi"

[dependencies.bio]
version = "1.1.0"

[dependencies.clap]
version = "3"

[dependencies.csv]
version = "1.1.6"

[dependencies.fastq]
version = "0.6"

[dependencies.flate2]
version = "1.0.26"

[dependencies.glob]
version = "0.3.0"

[dependencies.hamming]
version = "0.1"

[dependencies.hashbrown]
version = "0.13.2"

[dependencies.indicatif]
version = "0.17.5"

[dependencies.lazy_static]
version = "1.4.0"

[dependencies.libflate]
version = "0.1.4"

[dependencies.maplit]
version = "1.0.2"

[dependencies.niffler]
version = "2.3.0"

[dependencies.petgraph]
version = "0.5.1"

[dependencies.polars]
version = "0.32.0"
features = ["lazy"]

[dependencies.rand]
version = "0.8.5"

[dependencies.rand_chacha]
version = "0.3.1"

[dependencies.rayon]
version = "1.8.1"

[dependencies.regex]
version = "1.5.4"

[dependencies.rust-htslib]
version = "0.46.0"
default-features = false

[dependencies.seq_io]
version = "0.3.1"

[dependencies.thiserror]
version = "1.0"