88 87 83 79 74 68 60 45 Metazoa Choanoflagellata Filasterea 46 Rotosphaerida Fungi Amoebozoa Discoba 75 69 61 47 Chlorophyta Streptophyta Rhodophyta Glaucocystophyceae 48 Alveolata Stramenopiles 86 85 80 76 70 49 Firmicutes Tenericutes 62 50 Actinobacteria DeinococcusThermus Chloroflexi 51 Synergistetes Fusobacteria 63 52 Caldiserica Thermotogae Aquificae 84 81 71 64 53 Lentisphaerae Verrucomicrobia 54 Planctomycetes Chlamydiae Elusimicrobia 77 55 Fibrobacteres Gemmatimonadetes 65 56 Bacteroidetes Chlorobi Calditrichaeota 82 72 66 57 Thermodesulfobacteria delta/epsilon Nitrospirae Acidobacteria 78 73 67 58 Betaproteobacteria Gammaproteobacteria Alphaproteobacteria 59 Chrysiogenetes Deferribacteres Spirochaetes Cyanobacteria UNSAMPLED 38 TLFD_1_18_42 LOST 18 4 2 Actinobacteria Firmicutes TLFD_1_3_42 LOST Lentisphaerae 17 7 Alveolata Stramenopiles SL_1_16_69 LOST 16 12 TLFD_1_8_42 LOST Chloroflexi 11 Glaucocystophyceae Rhodophyta 15 Chlorophyta Streptophyta 37 35 33 23 21 SL_1_19_67 LOST Alphaproteobacteria SL_1_20_59 LOST Chrysiogenetes TLFD_1_22_42 LOST DeinococcusThermus 32 Amoebozoa 31 27 TL_1_25_34 LOST Discoba Fungi 30 Filasterea SL_1_29_45 LOST Metazoa TLFD_1_34_42 LOST Chlamydiae Spirochaetes