/*! * Copyright (c) by Contributors 2020 */ #include #include #include #include "xgboost/logging.h" #include "../../../src/common/probability_distribution.h" namespace xgboost { namespace common { template void RunDistributionGenericTest() { double integral_of_pdf = Distribution::CDF(-2.0); double integral_of_grad_pdf = Distribution::PDF(-2.0); double integral_of_hess_pdf = Distribution::GradPDF(-2.0); // Perform numerical differentiation and integration // Enumerate 4000 grid points in range [-2, 2] for (int i = 0; i <= 4000; ++i) { const double x = static_cast(i) / 1000.0 - 2.0; // Numerical differentiation (p. 246, Numerical Analysis 2nd ed. by Timothy Sauer) EXPECT_NEAR((Distribution::CDF(x + 1e-5) - Distribution::CDF(x - 1e-5)) / 2e-5, Distribution::PDF(x), 6e-11); EXPECT_NEAR((Distribution::PDF(x + 1e-5) - Distribution::PDF(x - 1e-5)) / 2e-5, Distribution::GradPDF(x), 6e-11); EXPECT_NEAR((Distribution::GradPDF(x + 1e-5) - Distribution::GradPDF(x - 1e-5)) / 2e-5, Distribution::HessPDF(x), 6e-11); // Numerical integration using Trapezoid Rule (p. 257, Sauer) integral_of_pdf += 5e-4 * (Distribution::PDF(x - 1e-3) + Distribution::PDF(x)); integral_of_grad_pdf += 5e-4 * (Distribution::GradPDF(x - 1e-3) + Distribution::GradPDF(x)); integral_of_hess_pdf += 5e-4 * (Distribution::HessPDF(x - 1e-3) + Distribution::HessPDF(x)); EXPECT_NEAR(integral_of_pdf, Distribution::CDF(x), 2e-4); EXPECT_NEAR(integral_of_grad_pdf, Distribution::PDF(x), 2e-4); EXPECT_NEAR(integral_of_hess_pdf, Distribution::GradPDF(x), 2e-4); } } TEST(ProbabilityDistribution, DistributionGeneric) { // Assert d/dx CDF = PDF, d/dx PDF = GradPDF, d/dx GradPDF = HessPDF // Do this for every distribution type RunDistributionGenericTest(); RunDistributionGenericTest(); RunDistributionGenericTest(); } TEST(ProbabilityDistribution, NormalDist) { // "Three-sigma rule" (https://en.wikipedia.org/wiki/68–95–99.7_rule) // 68% of values are within 1 standard deviation away from the mean // 95% of values are within 2 standard deviation away from the mean // 99.7% of values are within 3 standard deviation away from the mean EXPECT_NEAR(NormalDistribution::CDF(0.5) - NormalDistribution::CDF(-0.5), 0.3829, 0.00005); EXPECT_NEAR(NormalDistribution::CDF(1.0) - NormalDistribution::CDF(-1.0), 0.6827, 0.00005); EXPECT_NEAR(NormalDistribution::CDF(1.5) - NormalDistribution::CDF(-1.5), 0.8664, 0.00005); EXPECT_NEAR(NormalDistribution::CDF(2.0) - NormalDistribution::CDF(-2.0), 0.9545, 0.00005); EXPECT_NEAR(NormalDistribution::CDF(2.5) - NormalDistribution::CDF(-2.5), 0.9876, 0.00005); EXPECT_NEAR(NormalDistribution::CDF(3.0) - NormalDistribution::CDF(-3.0), 0.9973, 0.00005); EXPECT_NEAR(NormalDistribution::CDF(3.5) - NormalDistribution::CDF(-3.5), 0.9995, 0.00005); EXPECT_NEAR(NormalDistribution::CDF(4.0) - NormalDistribution::CDF(-4.0), 0.9999, 0.00005); } TEST(ProbabilityDistribution, LogisticDist) { /** * Enforce known properties of the logistic distribution. * (https://en.wikipedia.org/wiki/Logistic_distribution) **/ // Enumerate 4000 grid points in range [-2, 2] for (int i = 0; i <= 4000; ++i) { const double x = static_cast(i) / 1000.0 - 2.0; // PDF = 1/4 * sech(x/2)**2 const double sech_x = 1.0 / std::cosh(x * 0.5); // hyperbolic secant at x/2 EXPECT_NEAR(0.25 * sech_x * sech_x, LogisticDistribution::PDF(x), 1e-15); // CDF = 1/2 + 1/2 * tanh(x/2) EXPECT_NEAR(0.5 + 0.5 * std::tanh(x * 0.5), LogisticDistribution::CDF(x), 1e-15); } } TEST(ProbabilityDistribution, ExtremeDist) { /** * Enforce known properties of the extreme distribution (also known as Gumbel distribution). * The mean is the negative of the Euler-Mascheroni constant. * The variance is 1/6 * pi**2. (https://mathworld.wolfram.com/GumbelDistribution.html) **/ // Enumerate 25000 grid points in range [-20, 5]. // Compute the mean (expected value) of the distribution using numerical integration. // Nearly all mass of the extreme distribution is concentrated between -20 and 5, // so numerically integrating x*PDF(x) over [-20, 5] gives good estimate of the mean. double mean = 0.0; for (int i = 0; i <= 25000; ++i) { const double x = static_cast(i) / 1000.0 - 20.0; // Numerical integration using Trapezoid Rule (p. 257, Sauer) mean += 5e-4 * ((x - 1e-3) * ExtremeDistribution::PDF(x - 1e-3) + x * ExtremeDistribution::PDF(x)); } EXPECT_NEAR(mean, -kEulerMascheroni, 1e-7); // Enumerate 25000 grid points in range [-20, 5]. // Compute the variance of the distribution using numerical integration. // Nearly all mass of the extreme distribution is concentrated between -20 and 5, // so numerically integrating (x-mean)*PDF(x) over [-20, 5] gives good estimate of the variance. double variance = 0.0; for (int i = 0; i <= 25000; ++i) { const double x = static_cast(i) / 1000.0 - 20.0; // Numerical integration using Trapezoid Rule (p. 257, Sauer) variance += 5e-4 * ((x - 1e-3 - mean) * (x - 1e-3 - mean) * ExtremeDistribution::PDF(x - 1e-3) + (x - mean) * (x - mean) * ExtremeDistribution::PDF(x)); } EXPECT_NEAR(variance, kPI * kPI / 6.0, 1e-6); } } // namespace common } // namespace xgboost