fasta_split

Crates.iofasta_split
lib.rsfasta_split
version0.1.3
sourcesrc
created_at2024-07-03 12:53:46.279083
updated_at2024-07-04 07:24:51.500527
descriptionSplit a fasta file into several fasta files
homepage
repositoryhttps://github.com/simonpenel/fasta_split
max_upload_size
id1290478
size65,765
Simon Penel (simonpenel)

documentation

README

Split a fasta file into several fasta files

https://crates.io/crates/fasta_split

https://github.com/simonpenel/fasta_split/

Install

cargo install fasta_split

Usage


Usage: fasta_split [OPTIONS] <FASTA_FILE> <FAM_FILE>

Arguments:
  <FASTA_FILE>  FASTA INPUT (file path or stdin)
  <FAM_FILE>    FAM_FILE INPUT (file path)

Options:
      --orphans  Include orphan families
  -h, --help     Print help
  -V, --version  Print version

Family file format

A tabular file:

FAM1  seqname2
FAM1  seqname3
FAM1  seqname4
...
FAM10  seqname101
FAM10  seqname102
FAM10  seqname103
FAM10  seqname104`
Commit count: 13

cargo fmt