filter_cigars
| Crates.io | filter_cigars |
| lib.rs | filter_cigars |
| version | 0.0.1 |
| created_at | 2022-12-28 19:17:54.200648+00 |
| updated_at | 2022-12-28 19:17:54.200648+00 |
| description | Filters reads from a BAM file that have insertions/deletions at the zero'th position, which gives errors in the variant caller `mutato` |
| homepage | |
| repository | https://github.com/cmdcolin/filter_cigars |
| max_upload_size | |
| id | 746952 |
| size | 27,802 |
Colin Diesh (cmdcolin)
documentation
README
Filter CIGARS
Removes CIGARs that mutato does not like
Install
cargo install filter_cigars
Usage
filter_cigars input.bam output.bam
Note
See https://www.biostars.org/p/9549545/ for source thread