kmer_gc

Crates.iokmer_gc
lib.rskmer_gc
version0.1.2
sourcesrc
created_at2019-07-11 06:09:09.628089
updated_at2019-07-11 06:43:35.168851
descriptionCreates a 2D histogram of GC content vs K-mer counts
homepagehttps://github.com/J-Wall/kmer_gc
repositoryhttps://github.com/J-Wall/kmer_gc
max_upload_size
id148230
size4,096
Jesse Wallace (J-Wall)

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README

kmer_gc

Generates a 2d histogram of GC content vs k-mer counts

USAGE:
    kmer_gc [OPTIONS] <INPUT> -k <K>

FLAGS:
    -h, --help       Prints help information
    -V, --version    Prints version information

OPTIONS:
    -k <K>
    -n, --nbins <N>          Number of bins in k-mer dimension (memory use will be O(NK), where K is k-mer length)
                             [default: 1000]
    -s, --sep <SEPARATOR>    Separator for output [default:  ]

ARGS:
    <INPUT>    Input file (with k-mer in 1st column and counts in 2nd column)
Commit count: 7

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