rust-jellyfish

• a rust implementation of the jellyfish for the counts.
• outputs both the unique counts, all counts.
• directly plots the histograms from the counts using the rust plotters.
• it will produce allkmers, uniquekmers, countkmers

Usage: kmerjellyfish <KMER_ARG> <FASTQFILE_ARG>

Arguments:
  <KMER_ARG>       please provide the kmer to be searched for the origin
  <FASTQFILE_ARG>  please provide the path to be searched for the strings containing the kmer

Options:
  -h, --help     Print help
  -V, --version  Print version

kmerjellyfish 4 ./sample-files/test.fastq

Gaurav Sablok