sourmash
| Crates.io | sourmash |
| lib.rs | sourmash |
| version | 0.21.0 |
| created_at | 2018-03-13 00:42:25.189672+00 |
| updated_at | 2025-06-28 13:04:18.844448+00 |
| description | tools for comparing biological sequences with k-mer sketches |
| homepage | |
| repository | https://github.com/sourmash-bio/sourmash |
| max_upload_size | |
| id | 55253 |
| size | 587,659 |
C. Titus Brown (ctb)
documentation
README
sourmash
🦀
Compute MinHash signatures for nucleotide (DNA/RNA) and protein sequences.
This is the core library used by sourmash. It exposes a C API that can be called from FFI in other languages, and it is how we use it in Python for building the sourmash application (CLI and Python API).
sourmash is a product of the Lab for Data-Intensive Biology at the UC Davis School of Veterinary Medicine.
Support
Please ask questions and files issues on Github.
Development
Development happens on github at sourmash-bio/sourmash.
Minimum supported Rust version
Currently the minimum supported Rust version is 1.74.0.